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Protein

Protein translation factor SUI1 homolog

Gene

Memar_1997

Organism
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. translation initiation factor activity Source: InterPro

GO - Biological processi

  1. regulation of translation Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Biological processi

Protein biosynthesis, Translation regulation

Enzyme and pathway databases

BioCyciMMAR368407:GH7L-2042-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Protein translation factor SUI1 homologUniRule annotation
Gene namesi
Ordered Locus Names:Memar_1997
OrganismiMethanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1)
Taxonomic identifieri368407 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanomicrobiaMethanomicrobialesMethanomicrobiaceaeMethanoculleus
ProteomesiUP000002146 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 101101Protein translation factor SUI1 homologPRO_1000006437Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi368407.Memar_1997.

Family & Domainsi

Sequence similaritiesi

Belongs to the SUI1 family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0023.
HOGENOMiHOG000279815.
KOiK03113.
OMAiMPEICPR.

Family and domain databases

Gene3Di3.30.780.10. 1 hit.
HAMAPiMF_00604. SUI1.
InterProiIPR022851. SUI1_arc.
IPR005872. SUI1_arc_bac.
IPR001950. TIF_SUI1.
[Graphical view]
PfamiPF01253. SUI1. 1 hit.
[Graphical view]
PIRSFiPIRSF037511. Transl_init_SUI1_pro. 1 hit.
SUPFAMiSSF55159. SSF55159. 1 hit.
TIGRFAMsiTIGR01158. SUI1_rel. 1 hit.
PROSITEiPS50296. SUI1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A3CX23-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNGGICPTCG LPKELCICEE VAKEQQRISV KINRRRYGKE VTVIEGLDPY
60 70 80 90 100
DIDLEDLSKF LKAKLACGGT VKDSSIELQG NHRERVKDLL AQKGYNMENI

S
Length:101
Mass (Da):11,313
Last modified:March 20, 2007 - v1
Checksum:i4AC0429E41D7775B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000562 Genomic DNA. Translation: ABN57923.1.
RefSeqiWP_011844832.1. NC_009051.1.
YP_001047905.1. NC_009051.1.

Genome annotation databases

EnsemblBacteriaiABN57923; ABN57923; Memar_1997.
GeneIDi4847103.
KEGGimem:Memar_1997.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000562 Genomic DNA. Translation: ABN57923.1.
RefSeqiWP_011844832.1. NC_009051.1.
YP_001047905.1. NC_009051.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi368407.Memar_1997.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABN57923; ABN57923; Memar_1997.
GeneIDi4847103.
KEGGimem:Memar_1997.

Phylogenomic databases

eggNOGiCOG0023.
HOGENOMiHOG000279815.
KOiK03113.
OMAiMPEICPR.

Enzyme and pathway databases

BioCyciMMAR368407:GH7L-2042-MONOMER.

Family and domain databases

Gene3Di3.30.780.10. 1 hit.
HAMAPiMF_00604. SUI1.
InterProiIPR022851. SUI1_arc.
IPR005872. SUI1_arc_bac.
IPR001950. TIF_SUI1.
[Graphical view]
PfamiPF01253. SUI1. 1 hit.
[Graphical view]
PIRSFiPIRSF037511. Transl_init_SUI1_pro. 1 hit.
SUPFAMiSSF55159. SSF55159. 1 hit.
TIGRFAMsiTIGR01158. SUI1_rel. 1 hit.
PROSITEiPS50296. SUI1. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 35101 / DSM 1498 / JR1.

Entry informationi

Entry nameiSUI1_METMJ
AccessioniPrimary (citable) accession number: A3CX23
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: March 20, 2007
Last modified: April 1, 2015
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Translation initiation factors
    List of translation initiation factor entries
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.