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Protein

Protein translation factor SUI1 homolog

Gene

Memar_1997

Organism
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Protein biosynthesis, Translation regulation

Names & Taxonomyi

Protein namesi
Recommended name:
Protein translation factor SUI1 homologUniRule annotation
Gene namesi
Ordered Locus Names:Memar_1997
OrganismiMethanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1)
Taxonomic identifieri368407 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanomicrobiaMethanomicrobialesMethanomicrobiaceaeMethanoculleus
Proteomesi
  • UP000002146 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_10000064371 – 101Protein translation factor SUI1 homologAdd BLAST101

Interactioni

Protein-protein interaction databases

STRINGi368407.Memar_1997.

Structurei

3D structure databases

ProteinModelPortaliA3CX23.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the SUI1 family.UniRule annotation

Phylogenomic databases

eggNOGiarCOG04223. Archaea.
COG0023. LUCA.
HOGENOMiHOG000279815.
KOiK03113.
OMAiMPEICPR.

Family and domain databases

CDDicd11567. YciH_like. 1 hit.
Gene3Di3.30.780.10. 1 hit.
HAMAPiMF_00604. SUI1. 1 hit.
InterProiIPR001950. SUI1.
IPR022851. SUI1_arc.
IPR005872. SUI1_arc_bac.
[Graphical view]
PfamiPF01253. SUI1. 1 hit.
[Graphical view]
PIRSFiPIRSF037511. Transl_init_SUI1_pro. 1 hit.
SUPFAMiSSF55159. SSF55159. 1 hit.
TIGRFAMsiTIGR01158. SUI1_rel. 1 hit.
PROSITEiPS50296. SUI1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A3CX23-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNGGICPTCG LPKELCICEE VAKEQQRISV KINRRRYGKE VTVIEGLDPY
60 70 80 90 100
DIDLEDLSKF LKAKLACGGT VKDSSIELQG NHRERVKDLL AQKGYNMENI

S
Length:101
Mass (Da):11,313
Last modified:March 20, 2007 - v1
Checksum:i4AC0429E41D7775B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000562 Genomic DNA. Translation: ABN57923.1.
RefSeqiWP_011844832.1. NC_009051.1.

Genome annotation databases

EnsemblBacteriaiABN57923; ABN57923; Memar_1997.
GeneIDi4847103.
KEGGimem:Memar_1997.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000562 Genomic DNA. Translation: ABN57923.1.
RefSeqiWP_011844832.1. NC_009051.1.

3D structure databases

ProteinModelPortaliA3CX23.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi368407.Memar_1997.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABN57923; ABN57923; Memar_1997.
GeneIDi4847103.
KEGGimem:Memar_1997.

Phylogenomic databases

eggNOGiarCOG04223. Archaea.
COG0023. LUCA.
HOGENOMiHOG000279815.
KOiK03113.
OMAiMPEICPR.

Family and domain databases

CDDicd11567. YciH_like. 1 hit.
Gene3Di3.30.780.10. 1 hit.
HAMAPiMF_00604. SUI1. 1 hit.
InterProiIPR001950. SUI1.
IPR022851. SUI1_arc.
IPR005872. SUI1_arc_bac.
[Graphical view]
PfamiPF01253. SUI1. 1 hit.
[Graphical view]
PIRSFiPIRSF037511. Transl_init_SUI1_pro. 1 hit.
SUPFAMiSSF55159. SSF55159. 1 hit.
TIGRFAMsiTIGR01158. SUI1_rel. 1 hit.
PROSITEiPS50296. SUI1. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiSUI1_METMJ
AccessioniPrimary (citable) accession number: A3CX23
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: March 20, 2007
Last modified: November 2, 2016
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Translation initiation factors
    List of translation initiation factor entries
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.