A3CS58 (A3CS58_METMJ) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
RNA-3'-phosphate cyclase EMBL ABN56208.1
EC=6.5.1.4 EMBL ABN56208.1

Gene names

Ordered Locus Names:

Memar_0274

Organism

Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) [Complete proteome] [HAMAP]

Taxonomic identifier

368407 [NCBI]

Taxonomic lineage

Archaea › Euryarchaeota › Methanomicrobia › Methanomicrobiales › Methanomicrobiaceae › Methanoculleus

Protein attributes

Sequence length	328 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL ABN56208.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	RNA processing Inferred from electronic annotation. Source: InterPro
Molecular function	RNA-3'-phosphate cyclase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A3CS58 [UniParc]. Last modified March 20, 2007. Version 1. Checksum: 678C47827687CDB2	FASTA	328	33,955
	10 20 30 40 50 60 MLTVDGSHLE GGGQILRLAV ALSAISATPV TVTRIRENRP NPGLAPQHIA AVRAVAGACD 70 80 90 100 110 120 AECTGLTPGS REISFAPGRI RRKDLAIDPG TAGSIPLIVQ AWLPVALQAG GSITVSGGTE 130 140 150 160 170 180 VPWSPTIDYL DRVFAPVLRR AGASIEITVR ERGYYPRGGG RVHVRVEPSR PDPIAIPEGE 190 200 210 220 230 240 EGGCGIVSCS AGLPAHVAER QAAAAQSLLD RELGLPCTAA LDPREGGTSV GSSVTVWSGA 250 260 270 280 290 300 KGAVALGKRG LPAEKVGQAA ARALADEYRS PGTVDIHLAD QLLVHLACHG GEYSTHTLTM 310 320 HAKTAGSLLA EFGYPIVCQK NDIVRFSA

References

[1]

"Complete genome sequence of Methanoculleus marisnigri Romesser et al. 1981 type strain JR1." Anderson I.J., Sieprawska-Lupa M., Lapidus A., Nolan M., Copeland A., Glavina Del Rio T., Tice H., Dalin E., Barry K., Saunders E., Han C., Brettin T., Detter J.C., Bruce D., Mikhailova N., Pitluck S., Hauser L., Land M. , Lucas S., Richardson P., Whitman W., Kyrpides N.C. Stand. Genomic Sci. 1:189-196(2009) [PubMed: 21304656] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 35101 / DSM 1498 / JR1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000562 Genomic DNA. Translation: ABN56208.1.
RefSeq	YP_001046190.1. NC_009051.1.
3D structure databases
ProteinModelPortal	A3CS58.
ModBase	Search...
Protein-protein interaction databases
STRING	A3CS58.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4846007.
GenomeReviews	Gene locus Memar_0274 in contig CP000562_GR.
KEGG	mem:Memar_0274.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	arNOG04553.
HOGENOM	HBG683539.
OMA	REISFAP.
PhylomeDB	A3CS58.
ProtClustDB	CLSK2472137.
Family and domain databases
InterPro	IPR013791. RNA3'-term_phos_cycl_insert. IPR023797. RNA3'_phos_cyclase_dom. IPR000228. RNA3'_term_phos_cyc. IPR017770. RNA3'_term_phos_cyc_type_1. IPR020719. RNA3'_term_phos_cycl-like_CS. IPR013796. RNA3'_term_phos_cycl_insert. IPR013792. RNA3'P_cycl/enolpyr_Trfase_a/b. [Graphical view]
Gene3D	G3DSA:3.30.360.20. G3DSA:3.30.360.20. 1 hit. G3DSA:3.65.10.20. RNA3'_term_phos_cycl. 2 hits.
KO	K01974.
PANTHER	PTHR11096. RNA3'_term_phos_cycl. 1 hit.
Pfam	PF01137. RTC. 1 hit. PF05189. RTC_insert. 1 hit. [Graphical view]
SUPFAM	SSF52913. RNA3'-term_phos_cycl_insert. 1 hit. SSF55205. RNA3'_cycl/enolpyr_transf_A/B. 1 hit.
TIGRFAMs	TIGR03399. RNA_3prim_cycl. 1 hit.
PROSITE	PS01287. RTC. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A3CS58_METMJ

Accession

Primary (citable) accession number: A3CS58

Entry history

Integrated into UniProtKB/TrEMBL:	March 20, 2007
Last sequence update:	March 20, 2007
Last modified:	December 14, 2011
This is version 29 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)