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A3C053 (BGL29_ORYSJ) Reviewed, UniProtKB/Swiss-Prot

Last modified March 19, 2014. Version 26. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Beta-glucosidase 29

Short name=Os9bglu29
EC=3.2.1.21
Gene names
Name:BGLU29
Ordered Locus Names:Os09g0490400, LOC_Os09g31410
ORF Names:OsJ_29835
OrganismOryza sativa subsp. japonica (Rice) [Reference proteome]
Taxonomic identifier39947 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza

Protein attributes

Sequence length494 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at transcript level

General annotation (Comments)

Catalytic activity

Hydrolysis of terminal, non-reducing beta-D-glucosyl residues with release of beta-D-glucose.

Sequence similarities

Belongs to the glycosyl hydrolase 1 family.

Sequence caution

The sequence BAF25452.2 differs from that shown. Reason: Erroneous gene model prediction.

The sequence EAZ45192.1 differs from that shown. Reason: Erroneous gene model prediction.

Ontologies

Keywords
   DomainSignal
   Molecular functionGlycosidase
Hydrolase
   PTMDisulfide bond
Glycoprotein
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processER body organization

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

carbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

cellular response to cold

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

cellular response to phosphate starvation

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

cellular response to salt stress

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

coumarin metabolic process

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

negative regulation of defense response

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

response to symbiotic fungus

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

   Cellular_componentER body

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

membrane

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

nucleus

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

peroxisome

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

plasmodesma

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

vacuole

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

   Molecular_functionbeta-glucosidase activity

Inferred from electronic annotation. Source: UniProtKB-EC

copper ion binding

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2828 Potential
Chain29 – 494466Beta-glucosidase 29
PRO_0000390346

Regions

Region454 – 4552Substrate binding By similarity

Sites

Active site1841Proton donor By similarity
Active site3981Nucleophile By similarity
Binding site491Substrate By similarity
Binding site1381Substrate By similarity
Binding site1831Substrate By similarity
Binding site3271Substrate By similarity
Binding site4471Substrate By similarity

Amino acid modifications

Glycosylation1031N-linked (GlcNAc...) Potential
Glycosylation2631N-linked (GlcNAc...) Potential
Glycosylation3521N-linked (GlcNAc...) Potential
Glycosylation4061N-linked (GlcNAc...) Potential
Disulfide bond203 ↔ 211 By similarity

Sequences

Sequence LengthMass (Da)Tools
A3C053 [UniParc].

Last modified December 15, 2009. Version 2.
Checksum: E090F33B47BD0FD4

FASTA49456,153
        10         20         30         40         50         60 
MAWLGIGMGR QIVPVLVFVA VLCSGVDASF NRYSFPKDFI FGTGSAAYQY EGAAKEGGKI 

        70         80         90        100        110        120 
LNGDTGDVAD DFYHRYKEDV NLLKDMNMDA FRFSISWSRI LPNGTLSGGV NKEGVAFYNN 

       130        140        150        160        170        180 
LINEIIAKGM KPFVTIFHWD TPQALESKYG GFLSENIIKD YVDFAEVCFR EFGDRVKFWA 

       190        200        210        220        230        240 
TFNEPWTYCS QGYGTGIHAL GRCSPYVSTS CAGGDSSREP YLAAHHVILA HATAVHLYRT 

       250        260        270        280        290        300 
KYQPTQHGQI GITAVSHWFV PYNDTAADRR VVQRSLDFMY GWFLDPIVHG DYPGTMRGWL 

       310        320        330        340        350        360 
GARLPAFTAE QAAAVRGSYD FIGVNYYTTY YAKSVPLPSS NRLSYDTDIR ANTTGFRNGK 

       370        380        390        400        410        420 
PIGPQEFTPI FFNYPPGLRE LLLYTKRRYN NPIIYVTENG IAEGNNKSLP ITEALKDGHR 

       430        440        450        460        470        480 
IEFHSKHLQF VNHAIKNGVN VKGYFTWTFM DCFEWGDGYL DRFGLIYIDR LNNLKRYHKQ 

       490 
SSYWIANFLK RKKY 

« Hide

References

« Hide 'large scale' references
[1]"The map-based sequence of the rice genome."
International rice genome sequencing project (IRGSP)
Nature 436:793-800(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nipponbare.
[2]"The rice annotation project database (RAP-DB): 2008 update."
The rice annotation project (RAP)
Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: GENOME REANNOTATION.
Strain: cv. Nipponbare.
[3]"The genomes of Oryza sativa: a history of duplications."
Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S., Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L. expand/collapse author list , Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J., Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X., Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y., Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L., Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H., Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z., Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L., Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F., Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M., McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.
PLoS Biol. 3:266-281(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nipponbare.
[4]"Analysis of rice glycosyl hydrolase family 1 and expression of Os4bglu12 beta-glucosidase."
Opassiri R., Pomthong B., Onkoksoong T., Akiyama T., Esen A., Ketudat Cairns J.R.
BMC Plant Biol. 6:33-33(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: GENE FAMILY, NOMENCLATURE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP008215 Genomic DNA. Translation: BAF25452.2. Sequence problems.
CM000146 Genomic DNA. Translation: EAZ45192.1. Sequence problems.
RefSeqNP_001063538.2. NM_001070073.2.
UniGeneOs.91726.

3D structure databases

ProteinModelPortalA3C053.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING39947.LOC_Os09g31410.2.

Protein family/group databases

CAZyGH1. Glycoside Hydrolase Family 1.

Proteomic databases

PRIDEA3C053.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsOS09T0490400-00; OS09T0490400-00; OS09G0490400.
GeneID4347440.
KEGGosa:4347440.

Organism-specific databases

GrameneA3C053.

Phylogenomic databases

eggNOGCOG2723.
ProtClustDBCLSN2697464.

Family and domain databases

Gene3D3.20.20.80. 1 hit.
InterProIPR001360. Glyco_hydro_1.
IPR018120. Glyco_hydro_1_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10353. PTHR10353. 1 hit.
PfamPF00232. Glyco_hydro_1. 1 hit.
[Graphical view]
PRINTSPR00131. GLHYDRLASE1.
SUPFAMSSF51445. SSF51445. 1 hit.
PROSITEPS00572. GLYCOSYL_HYDROL_F1_1. 1 hit.
PS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameBGL29_ORYSJ
AccessionPrimary (citable) accession number: A3C053
Secondary accession number(s): Q0J0P0
Entry history
Integrated into UniProtKB/Swiss-Prot: December 15, 2009
Last sequence update: December 15, 2009
Last modified: March 19, 2014
This is version 26 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Oryza sativa (rice)

Index of Oryza sativa entries and their corresponding gene designations

Glycosyl hydrolases

Classification of glycosyl hydrolase families and list of entries