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A3C053

- BGL29_ORYSJ

UniProt

A3C053 - BGL29_ORYSJ

Protein

Beta-glucosidase 29

Gene

BGLU29

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 4 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 28 (01 Oct 2014)
      Sequence version 2 (15 Dec 2009)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    Hydrolysis of terminal, non-reducing beta-D-glucosyl residues with release of beta-D-glucose.

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Binding sitei49 – 491SubstrateBy similarity
    Binding sitei138 – 1381SubstrateBy similarity
    Binding sitei183 – 1831SubstrateBy similarity
    Active sitei184 – 1841Proton donorBy similarity
    Binding sitei327 – 3271SubstrateBy similarity
    Active sitei398 – 3981NucleophilePROSITE-ProRule annotation
    Binding sitei447 – 4471SubstrateBy similarity

    GO - Molecular functioni

    1. beta-glucosidase activity Source: UniProtKB-EC
    2. copper ion binding Source: EnsemblPlants/Gramene

    GO - Biological processi

    1. carbohydrate metabolic process Source: InterPro
    2. cellular response to cold Source: EnsemblPlants/Gramene
    3. cellular response to phosphate starvation Source: EnsemblPlants/Gramene
    4. cellular response to salt stress Source: EnsemblPlants/Gramene
    5. coumarin metabolic process Source: EnsemblPlants/Gramene
    6. ER body organization Source: EnsemblPlants/Gramene
    7. negative regulation of defense response Source: EnsemblPlants/Gramene
    8. response to symbiotic fungus Source: EnsemblPlants/Gramene

    Keywords - Molecular functioni

    Glycosidase, Hydrolase

    Protein family/group databases

    CAZyiGH1. Glycoside Hydrolase Family 1.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Beta-glucosidase 29 (EC:3.2.1.21)
    Short name:
    Os9bglu29
    Gene namesi
    Name:BGLU29
    Ordered Locus Names:Os09g0490400, LOC_Os09g31410
    ORF Names:OsJ_29835
    OrganismiOryza sativa subsp. japonica (Rice)
    Taxonomic identifieri39947 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
    ProteomesiUP000000763: Chromosome 9

    Organism-specific databases

    GrameneiA3C053.

    Subcellular locationi

    GO - Cellular componenti

    1. ER body Source: EnsemblPlants/Gramene
    2. membrane Source: EnsemblPlants/Gramene
    3. nucleus Source: EnsemblPlants/Gramene
    4. peroxisome Source: EnsemblPlants/Gramene
    5. plasmodesma Source: EnsemblPlants/Gramene
    6. vacuole Source: EnsemblPlants/Gramene

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 2828Sequence AnalysisAdd
    BLAST
    Chaini29 – 494466Beta-glucosidase 29PRO_0000390346Add
    BLAST

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Glycosylationi103 – 1031N-linked (GlcNAc...)Sequence Analysis
    Disulfide bondi203 ↔ 211By similarity
    Glycosylationi263 – 2631N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi352 – 3521N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi406 – 4061N-linked (GlcNAc...)Sequence Analysis

    Keywords - PTMi

    Disulfide bond, Glycoprotein

    Proteomic databases

    PRIDEiA3C053.

    Interactioni

    Protein-protein interaction databases

    STRINGi39947.LOC_Os09g31410.2.

    Structurei

    3D structure databases

    ProteinModelPortaliA3C053.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Region

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Regioni454 – 4552Substrate bindingBy similarity

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 1 family.Curated

    Keywords - Domaini

    Signal

    Phylogenomic databases

    eggNOGiCOG2723.

    Family and domain databases

    Gene3Di3.20.20.80. 1 hit.
    InterProiIPR001360. Glyco_hydro_1.
    IPR018120. Glyco_hydro_1_AS.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10353. PTHR10353. 1 hit.
    PfamiPF00232. Glyco_hydro_1. 1 hit.
    [Graphical view]
    PRINTSiPR00131. GLHYDRLASE1.
    SUPFAMiSSF51445. SSF51445. 1 hit.
    PROSITEiPS00572. GLYCOSYL_HYDROL_F1_1. 1 hit.
    PS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    A3C053-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAWLGIGMGR QIVPVLVFVA VLCSGVDASF NRYSFPKDFI FGTGSAAYQY    50
    EGAAKEGGKI LNGDTGDVAD DFYHRYKEDV NLLKDMNMDA FRFSISWSRI 100
    LPNGTLSGGV NKEGVAFYNN LINEIIAKGM KPFVTIFHWD TPQALESKYG 150
    GFLSENIIKD YVDFAEVCFR EFGDRVKFWA TFNEPWTYCS QGYGTGIHAL 200
    GRCSPYVSTS CAGGDSSREP YLAAHHVILA HATAVHLYRT KYQPTQHGQI 250
    GITAVSHWFV PYNDTAADRR VVQRSLDFMY GWFLDPIVHG DYPGTMRGWL 300
    GARLPAFTAE QAAAVRGSYD FIGVNYYTTY YAKSVPLPSS NRLSYDTDIR 350
    ANTTGFRNGK PIGPQEFTPI FFNYPPGLRE LLLYTKRRYN NPIIYVTENG 400
    IAEGNNKSLP ITEALKDGHR IEFHSKHLQF VNHAIKNGVN VKGYFTWTFM 450
    DCFEWGDGYL DRFGLIYIDR LNNLKRYHKQ SSYWIANFLK RKKY 494
    Length:494
    Mass (Da):56,153
    Last modified:December 15, 2009 - v2
    Checksum:iE090F33B47BD0FD4
    GO

    Sequence cautioni

    The sequence BAF25452.2 differs from that shown. Reason: Erroneous gene model prediction.
    The sequence EAZ45192.1 differs from that shown. Reason: Erroneous gene model prediction.

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP008215 Genomic DNA. Translation: BAF25452.2. Sequence problems.
    CM000146 Genomic DNA. Translation: EAZ45192.1. Sequence problems.
    RefSeqiNP_001063538.2. NM_001070073.2.
    UniGeneiOs.91726.

    Genome annotation databases

    EnsemblPlantsiOS09T0490400-00; OS09T0490400-00; OS09G0490400.
    GeneIDi4347440.
    KEGGiosa:4347440.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP008215 Genomic DNA. Translation: BAF25452.2 . Sequence problems.
    CM000146 Genomic DNA. Translation: EAZ45192.1 . Sequence problems.
    RefSeqi NP_001063538.2. NM_001070073.2.
    UniGenei Os.91726.

    3D structure databases

    ProteinModelPortali A3C053.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 39947.LOC_Os09g31410.2.

    Protein family/group databases

    CAZyi GH1. Glycoside Hydrolase Family 1.

    Proteomic databases

    PRIDEi A3C053.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi OS09T0490400-00 ; OS09T0490400-00 ; OS09G0490400 .
    GeneIDi 4347440.
    KEGGi osa:4347440.

    Organism-specific databases

    Gramenei A3C053.

    Phylogenomic databases

    eggNOGi COG2723.

    Family and domain databases

    Gene3Di 3.20.20.80. 1 hit.
    InterProi IPR001360. Glyco_hydro_1.
    IPR018120. Glyco_hydro_1_AS.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10353. PTHR10353. 1 hit.
    Pfami PF00232. Glyco_hydro_1. 1 hit.
    [Graphical view ]
    PRINTSi PR00131. GLHYDRLASE1.
    SUPFAMi SSF51445. SSF51445. 1 hit.
    PROSITEi PS00572. GLYCOSYL_HYDROL_F1_1. 1 hit.
    PS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Nipponbare.
    2. "The rice annotation project database (RAP-DB): 2008 update."
      The rice annotation project (RAP)
      Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: GENOME REANNOTATION.
      Strain: cv. Nipponbare.
    3. "The genomes of Oryza sativa: a history of duplications."
      Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S., Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.
      , Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J., Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X., Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y., Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L., Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H., Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z., Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L., Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F., Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M., McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.
      PLoS Biol. 3:266-281(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Nipponbare.
    4. "Analysis of rice glycosyl hydrolase family 1 and expression of Os4bglu12 beta-glucosidase."
      Opassiri R., Pomthong B., Onkoksoong T., Akiyama T., Esen A., Ketudat Cairns J.R.
      BMC Plant Biol. 6:33-33(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: GENE FAMILY, NOMENCLATURE.

    Entry informationi

    Entry nameiBGL29_ORYSJ
    AccessioniPrimary (citable) accession number: A3C053
    Secondary accession number(s): Q0J0P0
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: December 15, 2009
    Last sequence update: December 15, 2009
    Last modified: October 1, 2014
    This is version 28 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Glycosyl hydrolases
      Classification of glycosyl hydrolase families and list of entries
    2. Oryza sativa (rice)
      Index of Oryza sativa entries and their corresponding gene designations
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3