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A3C053

- BGL29_ORYSJ

UniProt

A3C053 - BGL29_ORYSJ

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Protein
Beta-glucosidase 29
Gene
BGLU29, Os09g0490400, LOC_Os09g31410, OsJ_29835
Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 4 out of 5 - Experimental evidence at transcript leveli

Functioni

Catalytic activityi

Hydrolysis of terminal, non-reducing beta-D-glucosyl residues with release of beta-D-glucose.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei49 – 491Substrate By similarity
Binding sitei138 – 1381Substrate By similarity
Binding sitei183 – 1831Substrate By similarity
Active sitei184 – 1841Proton donor By similarity
Binding sitei327 – 3271Substrate By similarity
Active sitei398 – 3981Nucleophile By similarity
Binding sitei447 – 4471Substrate By similarity

GO - Molecular functioni

  1. beta-glucosidase activity Source: UniProtKB-EC
  2. copper ion binding Source: EnsemblPlants/Gramene

GO - Biological processi

  1. ER body organization Source: EnsemblPlants/Gramene
  2. carbohydrate metabolic process Source: InterPro
  3. cellular response to cold Source: EnsemblPlants/Gramene
  4. cellular response to phosphate starvation Source: EnsemblPlants/Gramene
  5. cellular response to salt stress Source: EnsemblPlants/Gramene
  6. coumarin metabolic process Source: EnsemblPlants/Gramene
  7. negative regulation of defense response Source: EnsemblPlants/Gramene
  8. response to symbiotic fungus Source: EnsemblPlants/Gramene
Complete GO annotation...

Keywords - Molecular functioni

Glycosidase, Hydrolase

Protein family/group databases

CAZyiGH1. Glycoside Hydrolase Family 1.

Names & Taxonomyi

Protein namesi
Recommended name:
Beta-glucosidase 29 (EC:3.2.1.21)
Short name:
Os9bglu29
Gene namesi
Name:BGLU29
Ordered Locus Names:Os09g0490400, LOC_Os09g31410
ORF Names:OsJ_29835
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
ProteomesiUP000000763: Chromosome 9

Organism-specific databases

GrameneiA3C053.

Subcellular locationi

GO - Cellular componenti

  1. ER body Source: EnsemblPlants/Gramene
  2. membrane Source: EnsemblPlants/Gramene
  3. nucleus Source: EnsemblPlants/Gramene
  4. peroxisome Source: EnsemblPlants/Gramene
  5. plasmodesma Source: EnsemblPlants/Gramene
  6. vacuole Source: EnsemblPlants/Gramene
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2828 Reviewed prediction
Add
BLAST
Chaini29 – 494466Beta-glucosidase 29
PRO_0000390346Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Glycosylationi103 – 1031N-linked (GlcNAc...) Reviewed prediction
Disulfide bondi203 ↔ 211 By similarity
Glycosylationi263 – 2631N-linked (GlcNAc...) Reviewed prediction
Glycosylationi352 – 3521N-linked (GlcNAc...) Reviewed prediction
Glycosylationi406 – 4061N-linked (GlcNAc...) Reviewed prediction

Keywords - PTMi

Disulfide bond, Glycoprotein

Proteomic databases

PRIDEiA3C053.

Interactioni

Protein-protein interaction databases

STRINGi39947.LOC_Os09g31410.2.

Structurei

3D structure databases

ProteinModelPortaliA3C053.

Family & Domainsi

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni454 – 4552Substrate binding By similarity

Sequence similaritiesi

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiCOG2723.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR001360. Glyco_hydro_1.
IPR018120. Glyco_hydro_1_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10353. PTHR10353. 1 hit.
PfamiPF00232. Glyco_hydro_1. 1 hit.
[Graphical view]
PRINTSiPR00131. GLHYDRLASE1.
SUPFAMiSSF51445. SSF51445. 1 hit.
PROSITEiPS00572. GLYCOSYL_HYDROL_F1_1. 1 hit.
PS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

A3C053-1 [UniParc]FASTAAdd to Basket

« Hide

MAWLGIGMGR QIVPVLVFVA VLCSGVDASF NRYSFPKDFI FGTGSAAYQY    50
EGAAKEGGKI LNGDTGDVAD DFYHRYKEDV NLLKDMNMDA FRFSISWSRI 100
LPNGTLSGGV NKEGVAFYNN LINEIIAKGM KPFVTIFHWD TPQALESKYG 150
GFLSENIIKD YVDFAEVCFR EFGDRVKFWA TFNEPWTYCS QGYGTGIHAL 200
GRCSPYVSTS CAGGDSSREP YLAAHHVILA HATAVHLYRT KYQPTQHGQI 250
GITAVSHWFV PYNDTAADRR VVQRSLDFMY GWFLDPIVHG DYPGTMRGWL 300
GARLPAFTAE QAAAVRGSYD FIGVNYYTTY YAKSVPLPSS NRLSYDTDIR 350
ANTTGFRNGK PIGPQEFTPI FFNYPPGLRE LLLYTKRRYN NPIIYVTENG 400
IAEGNNKSLP ITEALKDGHR IEFHSKHLQF VNHAIKNGVN VKGYFTWTFM 450
DCFEWGDGYL DRFGLIYIDR LNNLKRYHKQ SSYWIANFLK RKKY 494
Length:494
Mass (Da):56,153
Last modified:December 15, 2009 - v2
Checksum:iE090F33B47BD0FD4
GO

Sequence cautioni

The sequence BAF25452.2 differs from that shown. Reason: Erroneous gene model prediction.
The sequence EAZ45192.1 differs from that shown. Reason: Erroneous gene model prediction.

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP008215 Genomic DNA. Translation: BAF25452.2. Sequence problems.
CM000146 Genomic DNA. Translation: EAZ45192.1. Sequence problems.
RefSeqiNP_001063538.2. NM_001070073.2.
UniGeneiOs.91726.

Genome annotation databases

EnsemblPlantsiOS09T0490400-00; OS09T0490400-00; OS09G0490400.
GeneIDi4347440.
KEGGiosa:4347440.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP008215 Genomic DNA. Translation: BAF25452.2 . Sequence problems.
CM000146 Genomic DNA. Translation: EAZ45192.1 . Sequence problems.
RefSeqi NP_001063538.2. NM_001070073.2.
UniGenei Os.91726.

3D structure databases

ProteinModelPortali A3C053.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 39947.LOC_Os09g31410.2.

Protein family/group databases

CAZyi GH1. Glycoside Hydrolase Family 1.

Proteomic databases

PRIDEi A3C053.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi OS09T0490400-00 ; OS09T0490400-00 ; OS09G0490400 .
GeneIDi 4347440.
KEGGi osa:4347440.

Organism-specific databases

Gramenei A3C053.

Phylogenomic databases

eggNOGi COG2723.

Family and domain databases

Gene3Di 3.20.20.80. 1 hit.
InterProi IPR001360. Glyco_hydro_1.
IPR018120. Glyco_hydro_1_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10353. PTHR10353. 1 hit.
Pfami PF00232. Glyco_hydro_1. 1 hit.
[Graphical view ]
PRINTSi PR00131. GLHYDRLASE1.
SUPFAMi SSF51445. SSF51445. 1 hit.
PROSITEi PS00572. GLYCOSYL_HYDROL_F1_1. 1 hit.
PS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  2. "The rice annotation project database (RAP-DB): 2008 update."
    The rice annotation project (RAP)
    Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENOME REANNOTATION.
    Strain: cv. Nipponbare.
  3. "The genomes of Oryza sativa: a history of duplications."
    Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S., Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.
    , Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J., Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X., Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y., Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L., Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H., Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z., Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L., Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F., Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M., McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.
    PLoS Biol. 3:266-281(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  4. "Analysis of rice glycosyl hydrolase family 1 and expression of Os4bglu12 beta-glucosidase."
    Opassiri R., Pomthong B., Onkoksoong T., Akiyama T., Esen A., Ketudat Cairns J.R.
    BMC Plant Biol. 6:33-33(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENE FAMILY, NOMENCLATURE.

Entry informationi

Entry nameiBGL29_ORYSJ
AccessioniPrimary (citable) accession number: A3C053
Secondary accession number(s): Q0J0P0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 15, 2009
Last sequence update: December 15, 2009
Last modified: May 14, 2014
This is version 27 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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