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Protein

Probable monogalactosyldiacylglycerol synthase 2, chloroplastic

Gene

MGD2

Organism
Oryza sativa subsp. indica (Rice)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Involved in the synthesis of the major structural component of photosynthetic membranes.By similarity

Catalytic activityi

UDP-alpha-D-galactose + 1,2-diacyl-sn-glycerol = UDP + 3-beta-D-galactosyl-1,2-diacyl-sn-glycerol.

GO - Molecular functioni

  1. 1,2-diacylglycerol 3-beta-galactosyltransferase activity Source: UniProtKB-EC
  2. carbohydrate binding Source: InterPro

GO - Biological processi

  1. glycolipid biosynthetic process Source: InterPro
  2. lipid glycosylation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Names & Taxonomyi

Protein namesi
Recommended name:
Probable monogalactosyldiacylglycerol synthase 2, chloroplastic (EC:2.4.1.46)
Short name:
OsMGD2
Gene namesi
Name:MGD2
ORF Names:OsI_027692
OrganismiOryza sativa subsp. indica (Rice)
Taxonomic identifieri39946 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
ProteomesiUP000007015: Chromosome 8

Organism-specific databases

GrameneiA2YTP9.

Subcellular locationi

GO - Cellular componenti

  1. chloroplast membrane Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Chloroplast, Membrane, Plastid

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transit peptidei1 – 4242ChloroplastSequence AnalysisAdd
BLAST
Chaini43 – 469427Probable monogalactosyldiacylglycerol synthase 2, chloroplasticPRO_0000349428Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi39947.LOC_Os08g20420.1.

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyltransferase 28 family.Curated

Keywords - Domaini

Transit peptide

Phylogenomic databases

eggNOGiCOG0707.
HOGENOMiHOG000239591.

Family and domain databases

InterProiIPR009695. Diacylglyc_glucosyltr_N.
IPR007235. Glyco_trans_28_C.
[Graphical view]
PfamiPF04101. Glyco_tran_28_C. 1 hit.
PF06925. MGDG_synth. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

A2YTP9-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MVISVATPRR SIRDAVLGGV LGAGGRQLYQ PLRCAFYDGA AGGGLTAALS
60 70 80 90 100
EDGAEGGVPL PCGRKTAAAK NVLILMSDTG GGHRASAEAL RDAFRLEFGD
110 120 130 140 150
AYQVFVRDLG KEYGGWPLND MERSYKFMIR HVRLWKVAFH GTSPRWVHGM
160 170 180 190 200
YLAALAYFYA NEVVAGIMRY NPDIIISVHP LMQHIPLWVL KWQSLHPKVP
210 220 230 240 250
FVTVITDLNT CHPTWFHHGV TRCYCPSAEV AKRALLRGLE PSQIRVYGLP
260 270 280 290 300
IRPSFCRAVL DKDELRKELD MDPDLPAVLL MGGGEGMGPV EETATALSDE
310 320 330 340 350
LYDRRRRRPV GQIVVICGRN QVLRSTLQSS RWNVPVKIRG FEKQMEKWMG
360 370 380 390 400
ACDCIITKAG PGTIAEALIR GLPIILNDFI PGQEVGNVPY VVDNGAGVFS
410 420 430 440 450
KDPREAARQV ARWFTTHTNE LRRYSLNALK LAQPEAVFDI VKDIHKLQQQ
460
PATVTRIPYS LTSSFSYSI
Length:469
Mass (Da):52,068
Last modified:September 2, 2008 - v2
Checksum:i60E21133A132AEE7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000133 Genomic DNA. No translation available.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000133 Genomic DNA. No translation available.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi39947.LOC_Os08g20420.1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Organism-specific databases

GrameneiA2YTP9.

Phylogenomic databases

eggNOGiCOG0707.
HOGENOMiHOG000239591.

Family and domain databases

InterProiIPR009695. Diacylglyc_glucosyltr_N.
IPR007235. Glyco_trans_28_C.
[Graphical view]
PfamiPF04101. Glyco_tran_28_C. 1 hit.
PF06925. MGDG_synth. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The genomes of Oryza sativa: a history of duplications."
    Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S., Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.
    , Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J., Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X., Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y., Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L., Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H., Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z., Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L., Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F., Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M., McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.
    PLoS Biol. 3:266-281(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. 93-11.

Entry informationi

Entry nameiMGDG2_ORYSI
AccessioniPrimary (citable) accession number: A2YTP9
Entry historyi
Integrated into UniProtKB/Swiss-Prot: September 2, 2008
Last sequence update: September 2, 2008
Last modified: January 7, 2015
This is version 32 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.