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A2YQ93 (PRR37_ORYSI) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 38. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Two-component response regulator-like PRR37
Alternative name(s):
Pseudo-response regulator 37
Short name=OsPRR37
Gene names
Name:PRR37
ORF Names:OsI_026486
OrganismOryza sativa subsp. indica (Rice)
Taxonomic identifier39946 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza

Protein attributes

Sequence length742 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Function

Controls photoperiodic flowering response. Seems to be one of the component of the circadian clock. Expression of several members of the ARR-like family is controlled by circadian rhythm. The particular coordinated sequential expression of PRR73, PRR37, PRR95, PRR59 and PPR1 result to circadian waves that may be at the basis of the endogenous circadian clock By similarity.

Subcellular location

Nucleus Probable.

Induction

Expressed with a circadian rhythm showing a broad peak in the middle day. Ref.2

Sequence similarities

Belongs to the ARR-like family.

Contains 1 CCT domain.

Contains 1 response regulatory domain.

Caution

Lacks the phospho-accepting Asp (here Glu-114), present in the receiver domain, which is one of the conserved features of two-component response regulators (ARRs) family.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 742742Two-component response regulator-like PRR37
PRO_0000303007

Regions

Domain63 – 181119Response regulatory
Domain682 – 72443CCT

Experimental info

Sequence conflict421I → T in BAD38858. Ref.2
Sequence conflict471R → P in BAD38858. Ref.2
Sequence conflict109 – 1102DL → VF in AAQ83694. Ref.3
Sequence conflict132 – 1387HNICKNI → PQYFARIF in AAQ83694. Ref.3
Sequence conflict2141S → N in BAD38858. Ref.2
Sequence conflict3831T → A in BAD38858. Ref.2
Sequence conflict4201D → G in CM000132. Ref.1
Sequence conflict6391N → D in BAD38858. Ref.2

Sequences

Sequence LengthMass (Da)Tools
A2YQ93 [UniParc].

Last modified September 11, 2007. Version 2.
Checksum: 5008A379861CCC96

FASTA74279,957
        10         20         30         40         50         60 
MMGTAHHNQT AGSALGVGVG DANDAVPGAG GGGYSDPDGG PISGVQRPPQ VCWERFIQKK 

        70         80         90        100        110        120 
TIKVLLVDSD DSTRQVVSAL LRHCMYEVIP AENGQQAWTY LEDMQNSIDL VLTEVVMPGV 

       130        140        150        160        170        180 
SGISLLSRIM NHNICKNIPV IMMSSNDAMG TVFKCLSKGA VDFLVKPIRK NELKNLWQHV 

       190        200        210        220        230        240 
WRRCHSSSGS GSESGIQTQK CAKSKSGDES NNNSGSNDDD DDDGVIMGLN ARDGSDNGSG 

       250        260        270        280        290        300 
TQAQSSWTKR AVEIDSPQAM SPDQLADPPD STCAQVIHLK SDICSNRWLP CTSNKNSKKQ 

       310        320        330        340        350        360 
KETNDDFKGK DLEIGSPRNL NTAYQSSPNE RSIKPTDRRN EYPLQNNSKE AAMENLEESS 

       370        380        390        400        410        420 
VRAADLIGSM AKNMDAQQAA RATNAPNCSS KVPEGKDKNR DNIMPSLELS LKRSRSTGDD 

       430        440        450        460        470        480 
ANAIQEEQRN VLRRSDLSAF TRYHTPVASN QGGTGFVGSC SPHDNISEAM KTDSAYNMKS 

       490        500        510        520        530        540 
NSDAAPIKQG SNGSSNNNDM GSTTKNVVTK PSTNKERVMS PSAVKANGHT SAFHPAQHWT 

       550        560        570        580        590        600 
SPANTTGKEK TDEVANNAAK RAQPGEVQSN LVQHPRPILH YVHFDVSREN GGSGAPQCGS 

       610        620        630        640        650        660 
SNVFDPPVEG HAANYGVNGS NSGSNNGSNG QNGSTTAVNA ERPNMEIANG TINKSGPGGG 

       670        680        690        700        710        720 
NGSGSGSGND MYLKRFTQRE HRVAAVIKFR QKRKERNFGK KVRYQSRKRL AEQRPRVRGQ 

       730        740 
FVRQAVQDQQ QQGGGREAAA DR 

« Hide

References

« Hide 'large scale' references
[1]"The genomes of Oryza sativa: a history of duplications."
Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S., Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L. expand/collapse author list , Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J., Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X., Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y., Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L., Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H., Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z., Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L., Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F., Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M., McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.
PLoS Biol. 3:266-281(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. 93-11.
[2]"Circadian-associated rice pseudo response regulators (OsPRRs): insight into the control of flowering time."
Murakami M., Matsushika A., Ashikari M., Yamashino T., Mizuno T.
Biosci. Biotechnol. Biochem. 69:410-414(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 1-704, INDUCTION.
Strain: cv. Kasalath.
[3]"Differential expression of pseudo-response regulator gene in rice hybrid F1 (Shanyou 63) and its parents."
Wang Y., Wei C., Yang J.
Submitted (AUG-2003) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 104-742.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CM000132 Genomic DNA. No translation available.
AB189042 mRNA. Translation: BAD38858.1.
AY359964 mRNA. Translation: AAQ83694.1.

3D structure databases

ProteinModelPortalA2YQ93.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Organism-specific databases

GrameneA2YQ93.

Phylogenomic databases

eggNOGCOG3437.
HOGENOMHOG000034018.

Family and domain databases

InterProIPR010402. CCT_domain.
IPR011006. CheY-like_superfamily.
IPR001789. Sig_transdc_resp-reg_receiver.
[Graphical view]
PfamPF06203. CCT. 1 hit.
PF00072. Response_reg. 1 hit.
[Graphical view]
SMARTSM00448. REC. 1 hit.
[Graphical view]
SUPFAMSSF52172. SSF52172. 1 hit.
PROSITEPS51017. CCT. 1 hit.
PS50110. RESPONSE_REGULATORY. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry namePRR37_ORYSI
AccessionPrimary (citable) accession number: A2YQ93
Secondary accession number(s): Q689G5 expand/collapse secondary AC list , Q689G8, Q6UV11, Q6Z3X9
Entry history
Integrated into UniProtKB/Swiss-Prot: September 11, 2007
Last sequence update: September 11, 2007
Last modified: April 16, 2014
This is version 38 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families