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A2YQ93

- PRR37_ORYSI

UniProt

A2YQ93 - PRR37_ORYSI

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Protein

Two-component response regulator-like PRR37

Gene

PRR37

Organism
Oryza sativa subsp. indica (Rice)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli

Functioni

Controls photoperiodic flowering response. Seems to be one of the component of the circadian clock. Expression of several members of the ARR-like family is controlled by circadian rhythm. The particular coordinated sequential expression of PRR73, PRR37, PRR95, PRR59 and PPR1 result to circadian waves that may be at the basis of the endogenous circadian clock (By similarity).By similarity

GO - Biological processi

  1. phosphorelay signal transduction system Source: UniProtKB-KW
  2. regulation of transcription, DNA-templated Source: UniProtKB-KW
  3. rhythmic process Source: UniProtKB-KW
  4. transcription, DNA-templated Source: UniProtKB-KW
Complete GO annotation...

Keywords - Biological processi

Biological rhythms, Transcription, Transcription regulation, Two-component regulatory system

Names & Taxonomyi

Protein namesi
Recommended name:
Two-component response regulator-like PRR37
Alternative name(s):
Pseudo-response regulator 37
Short name:
OsPRR37
Gene namesi
Name:PRR37
ORF Names:OsI_026486
OrganismiOryza sativa subsp. indica (Rice)
Taxonomic identifieri39946 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza

Organism-specific databases

GrameneiA2YQ93.

Subcellular locationi

Nucleus Curated

GO - Cellular componenti

  1. nucleus Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 742742Two-component response regulator-like PRR37PRO_0000303007Add
BLAST

Expressioni

Inductioni

Expressed with a circadian rhythm showing a broad peak in the middle day.1 Publication

Structurei

3D structure databases

ProteinModelPortaliA2YQ93.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini63 – 181119Response regulatoryPROSITE-ProRule annotationAdd
BLAST
Domaini682 – 72443CCTPROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Belongs to the ARR-like family.Curated
Contains 1 CCT domain.PROSITE-ProRule annotation
Contains 1 response regulatory domain.PROSITE-ProRule annotation

Phylogenomic databases

eggNOGiCOG3437.
HOGENOMiHOG000034018.

Family and domain databases

InterProiIPR010402. CCT_domain.
IPR011006. CheY-like_superfamily.
IPR001789. Sig_transdc_resp-reg_receiver.
[Graphical view]
PfamiPF06203. CCT. 1 hit.
PF00072. Response_reg. 1 hit.
[Graphical view]
SMARTiSM00448. REC. 1 hit.
[Graphical view]
SUPFAMiSSF52172. SSF52172. 1 hit.
PROSITEiPS51017. CCT. 1 hit.
PS50110. RESPONSE_REGULATORY. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A2YQ93-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MMGTAHHNQT AGSALGVGVG DANDAVPGAG GGGYSDPDGG PISGVQRPPQ
60 70 80 90 100
VCWERFIQKK TIKVLLVDSD DSTRQVVSAL LRHCMYEVIP AENGQQAWTY
110 120 130 140 150
LEDMQNSIDL VLTEVVMPGV SGISLLSRIM NHNICKNIPV IMMSSNDAMG
160 170 180 190 200
TVFKCLSKGA VDFLVKPIRK NELKNLWQHV WRRCHSSSGS GSESGIQTQK
210 220 230 240 250
CAKSKSGDES NNNSGSNDDD DDDGVIMGLN ARDGSDNGSG TQAQSSWTKR
260 270 280 290 300
AVEIDSPQAM SPDQLADPPD STCAQVIHLK SDICSNRWLP CTSNKNSKKQ
310 320 330 340 350
KETNDDFKGK DLEIGSPRNL NTAYQSSPNE RSIKPTDRRN EYPLQNNSKE
360 370 380 390 400
AAMENLEESS VRAADLIGSM AKNMDAQQAA RATNAPNCSS KVPEGKDKNR
410 420 430 440 450
DNIMPSLELS LKRSRSTGDD ANAIQEEQRN VLRRSDLSAF TRYHTPVASN
460 470 480 490 500
QGGTGFVGSC SPHDNISEAM KTDSAYNMKS NSDAAPIKQG SNGSSNNNDM
510 520 530 540 550
GSTTKNVVTK PSTNKERVMS PSAVKANGHT SAFHPAQHWT SPANTTGKEK
560 570 580 590 600
TDEVANNAAK RAQPGEVQSN LVQHPRPILH YVHFDVSREN GGSGAPQCGS
610 620 630 640 650
SNVFDPPVEG HAANYGVNGS NSGSNNGSNG QNGSTTAVNA ERPNMEIANG
660 670 680 690 700
TINKSGPGGG NGSGSGSGND MYLKRFTQRE HRVAAVIKFR QKRKERNFGK
710 720 730 740
KVRYQSRKRL AEQRPRVRGQ FVRQAVQDQQ QQGGGREAAA DR
Length:742
Mass (Da):79,957
Last modified:September 11, 2007 - v2
Checksum:i5008A379861CCC96
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti42 – 421I → T in BAD38858. (PubMed:15725670)Curated
Sequence conflicti47 – 471R → P in BAD38858. (PubMed:15725670)Curated
Sequence conflicti109 – 1102DL → VF in AAQ83694. 1 PublicationCurated
Sequence conflicti132 – 1387HNICKNI → PQYFARIF in AAQ83694. 1 PublicationCurated
Sequence conflicti214 – 2141S → N in BAD38858. (PubMed:15725670)Curated
Sequence conflicti383 – 3831T → A in BAD38858. (PubMed:15725670)Curated
Sequence conflicti420 – 4201D → G in CM000132. (PubMed:15685292)Curated
Sequence conflicti639 – 6391N → D in BAD38858. (PubMed:15725670)Curated

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CM000132 Genomic DNA. No translation available.
AB189042 mRNA. Translation: BAD38858.1.
AY359964 mRNA. Translation: AAQ83694.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CM000132 Genomic DNA. No translation available.
AB189042 mRNA. Translation: BAD38858.1 .
AY359964 mRNA. Translation: AAQ83694.1 .

3D structure databases

ProteinModelPortali A2YQ93.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Organism-specific databases

Gramenei A2YQ93.

Phylogenomic databases

eggNOGi COG3437.
HOGENOMi HOG000034018.

Family and domain databases

InterProi IPR010402. CCT_domain.
IPR011006. CheY-like_superfamily.
IPR001789. Sig_transdc_resp-reg_receiver.
[Graphical view ]
Pfami PF06203. CCT. 1 hit.
PF00072. Response_reg. 1 hit.
[Graphical view ]
SMARTi SM00448. REC. 1 hit.
[Graphical view ]
SUPFAMi SSF52172. SSF52172. 1 hit.
PROSITEi PS51017. CCT. 1 hit.
PS50110. RESPONSE_REGULATORY. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "The genomes of Oryza sativa: a history of duplications."
    Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S., Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.
    , Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J., Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X., Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y., Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L., Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H., Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z., Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L., Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F., Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M., McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.
    PLoS Biol. 3:266-281(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. 93-11.
  2. "Circadian-associated rice pseudo response regulators (OsPRRs): insight into the control of flowering time."
    Murakami M., Matsushika A., Ashikari M., Yamashino T., Mizuno T.
    Biosci. Biotechnol. Biochem. 69:410-414(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 1-704, INDUCTION.
    Strain: cv. Kasalath.
  3. "Differential expression of pseudo-response regulator gene in rice hybrid F1 (Shanyou 63) and its parents."
    Wang Y., Wei C., Yang J.
    Submitted (AUG-2003) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 104-742.

Entry informationi

Entry nameiPRR37_ORYSI
AccessioniPrimary (citable) accession number: A2YQ93
Secondary accession number(s): Q689G5
, Q689G8, Q6UV11, Q6Z3X9
Entry historyi
Integrated into UniProtKB/Swiss-Prot: September 11, 2007
Last sequence update: September 11, 2007
Last modified: October 29, 2014
This is version 40 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Caution

Lacks the phospho-accepting Asp (here Glu-114), present in the receiver domain, which is one of the conserved features of two-component response regulators (ARRs) family.Curated

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3