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A2Y9M4

- SSY1_ORYSI

UniProt

A2Y9M4 - SSY1_ORYSI

Protein

Soluble starch synthase 1, chloroplastic/amyloplastic

Gene

OsI_021017

Organism
Oryza sativa subsp. indica (Rice)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 42 (01 Oct 2014)
      Sequence version 1 (20 Mar 2007)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1).

    Pathwayi

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Binding sitei147 – 1471ADP-glucoseBy similarity

    GO - Molecular functioni

    1. starch synthase activity Source: UniProtKB-EC

    GO - Biological processi

    1. amylopectin biosynthetic process Source: EnsemblPlants/Gramene
    2. starch biosynthetic process Source: UniProtKB-UniPathway

    Keywords - Molecular functioni

    Glycosyltransferase, Transferase

    Keywords - Biological processi

    Starch biosynthesis

    Enzyme and pathway databases

    UniPathwayiUPA00152.

    Protein family/group databases

    CAZyiGT5. Glycosyltransferase Family 5.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Soluble starch synthase 1, chloroplastic/amyloplastic (EC:2.4.1.21)
    Alternative name(s):
    SSS 1
    Starch synthase I
    Gene namesi
    ORF Names:OsI_021017
    OrganismiOryza sativa subsp. indica (Rice)
    Taxonomic identifieri39946 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza

    Organism-specific databases

    GrameneiA2Y9M4.

    Subcellular locationi

    Plastidchloroplast. Plastidamyloplast
    Note: Amyloplast or chloroplast, soluble.Curated

    GO - Cellular componenti

    1. amyloplast Source: UniProtKB-SubCell
    2. chloroplast stroma Source: EnsemblPlants/Gramene

    Keywords - Cellular componenti

    Amyloplast, Chloroplast, Plastid

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Transit peptidei1 – 113113ChloroplastBy similarityAdd
    BLAST
    Chaini114 – 641528Soluble starch synthase 1, chloroplastic/amyloplasticPRO_0000295650Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi39947.LOC_Os06g06560.1.

    Structurei

    3D structure databases

    ProteinModelPortaliA2Y9M4.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Keywords - Domaini

    Transit peptide

    Phylogenomic databases

    eggNOGiCOG0297.
    HOGENOMiHOG000294940.

    Family and domain databases

    HAMAPiMF_00484. Glycogen_synth.
    InterProiIPR001296. Glyco_trans_1.
    IPR011835. Glycogen/starch_synth.
    IPR013534. Starch_synth_cat_dom.
    [Graphical view]
    PfamiPF08323. Glyco_transf_5. 1 hit.
    PF00534. Glycos_transf_1. 1 hit.
    [Graphical view]
    TIGRFAMsiTIGR02095. glgA. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    A2Y9M4-1 [UniParc]FASTAAdd to Basket

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    MATAAGMGIG AACLVAPQVR PGRRLRLQRV RRRCVAELSR DGGSAQRPLA    50
    PAPLVKQPVL PTFLVPTSTP PAPTQSPAPA PTPPPLPDSG VGEIEPDLEG 100
    LTEDSIDKTI FVASEQESEI MDVKEQAQAK VTRSVVFVTG EASPYAKSGG 150
    LGDVCGSLPI ALALRGHRVM VVMPRYMNGA LNKNFANAFY TEKHIKIPCF 200
    GGEHEVTFFH EYRDSVDWVF VDHPSYHRPG NLYGDNFGAF GDNQFRYTLL 250
    CYAACEAPLI LELGGYIYGQ KCMFVVNDWH ASLVPVLLAA KYRPYGVYRD 300
    ARSVLVIHNL AHQGVEPAST YPDLGLPPEW YGALEWVFPE WARRHALDKG 350
    EAVNFLKGAV VTADRIVTVS QGYSWEVTTA EGGQGLNELL SSRKSVLNGI 400
    VNGIDINDWN PSTDKFLPYH YSVDDLSGKA KCKAELQEEL GLPIRPDVPL 450
    IGFIGRLDYQ KGIDLIKLAI PDLMRDNIQF VMLGSGDPGF EGWMRSTESG 500
    YRDKFRGWVG FSVPVSHRIT AGCDILLMPS RFEPCGLNQL YAMQYGTVPV 550
    VHGTGGLRDT VENFNPFAEK GEQGTGWAFS PLTIEKMLWA LRMAISTYRE 600
    HKSSWEGLMK RGMSSDFTWD HAASQYEQIF EWAFMDQPYV M 641
    Length:641
    Mass (Da):70,953
    Last modified:March 20, 2007 - v1
    Checksum:iFBCBB004DC252CD1
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AY299404 mRNA. Translation: AAP56350.1.
    CM000131 Genomic DNA. Translation: EAY99784.1.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AY299404 mRNA. Translation: AAP56350.1 .
    CM000131 Genomic DNA. Translation: EAY99784.1 .

    3D structure databases

    ProteinModelPortali A2Y9M4.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 39947.LOC_Os06g06560.1.

    Protein family/group databases

    CAZyi GT5. Glycosyltransferase Family 5.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Organism-specific databases

    Gramenei A2Y9M4.

    Phylogenomic databases

    eggNOGi COG0297.
    HOGENOMi HOG000294940.

    Enzyme and pathway databases

    UniPathwayi UPA00152 .

    Family and domain databases

    HAMAPi MF_00484. Glycogen_synth.
    InterProi IPR001296. Glyco_trans_1.
    IPR011835. Glycogen/starch_synth.
    IPR013534. Starch_synth_cat_dom.
    [Graphical view ]
    Pfami PF08323. Glyco_transf_5. 1 hit.
    PF00534. Glycos_transf_1. 1 hit.
    [Graphical view ]
    TIGRFAMsi TIGR02095. glgA. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Oryza sativa (indica cultivar-group) putative soluble starch synthase I gene."
      Jiang H.W., Dian W.M., Wu P.
      Submitted (MAY-2003) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [MRNA].
    2. "The genomes of Oryza sativa: a history of duplications."
      Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S., Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.
      , Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J., Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X., Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y., Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L., Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H., Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z., Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L., Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F., Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M., McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.
      PLoS Biol. 3:266-281(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. 93-11.

    Entry informationi

    Entry nameiSSY1_ORYSI
    AccessioniPrimary (citable) accession number: A2Y9M4
    Secondary accession number(s): O24206
    , Q40739, Q5WA90, Q7Y044
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: July 24, 2007
    Last sequence update: March 20, 2007
    Last modified: October 1, 2014
    This is version 42 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Miscellaneous

    Three forms of soluble starch synthase were purified: RSS1, RSS2 and RSS3.

    Documents

    1. PATHWAY comments
      Index of metabolic and biosynthesis pathways
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3