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A2XFB7

- PRR73_ORYSI

UniProt

A2XFB7 - PRR73_ORYSI

Protein

Two-component response regulator-like PRR73

Gene

PRR73

Organism
Oryza sativa subsp. indica (Rice)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 34 (01 Oct 2014)
      Sequence version 2 (11 Sep 2007)
      Previous versions | rss
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    Functioni

    Controls photoperiodic flowering response. Seems to be one of the component of the circadian clock. Expression of several members of the ARR-like family is controlled by circadian rhythm. The particular coordinated sequential expression of PRR73, PRR37, PRR95, PRR59 and PPR1 result to circadian waves that may be at the basis of the endogenous circadian clock By similarity.By similarity

    GO - Molecular functioni

    1. phosphorelay response regulator activity Source: InterPro

    GO - Biological processi

    1. regulation of transcription, DNA-templated Source: UniProtKB-KW
    2. rhythmic process Source: UniProtKB-KW
    3. transcription, DNA-templated Source: UniProtKB-KW

    Keywords - Biological processi

    Biological rhythms, Transcription, Transcription regulation, Two-component regulatory system

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Two-component response regulator-like PRR73
    Alternative name(s):
    Pseudo-response regulator 73
    Short name:
    OsPRR73
    Gene namesi
    Name:PRR73
    ORF Names:OsI_010760
    OrganismiOryza sativa subsp. indica (Rice)
    Taxonomic identifieri39946 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza

    Organism-specific databases

    GrameneiA2XFB7.

    Subcellular locationi

    Nucleus Curated

    GO - Cellular componenti

    1. nucleus Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Nucleus

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 767767Two-component response regulator-like PRR73PRO_0000303008Add
    BLAST

    Expressioni

    Inductioni

    Expressed with a circadian rhythm showing a broad peak in the middle day.1 Publication

    Interactioni

    Protein-protein interaction databases

    STRINGi39946.BGIOSIBCE010643.

    Structurei

    3D structure databases

    ProteinModelPortaliA2XFB7.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Domains and Repeats

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Domaini82 – 200119Response regulatoryPROSITE-ProRule annotationAdd
    BLAST
    Domaini712 – 75443CCTPROSITE-ProRule annotationAdd
    BLAST

    Compositional bias

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Compositional biasi238 – 25114Asp-richAdd
    BLAST

    Sequence similaritiesi

    Belongs to the ARR-like family.Curated
    Contains 1 CCT domain.PROSITE-ProRule annotation
    Contains 1 response regulatory domain.PROSITE-ProRule annotation

    Phylogenomic databases

    eggNOGiCOG0784.
    HOGENOMiHOG000034018.

    Family and domain databases

    InterProiIPR010402. CCT_domain.
    IPR011006. CheY-like_superfamily.
    IPR001789. Sig_transdc_resp-reg_receiver.
    [Graphical view]
    PfamiPF06203. CCT. 1 hit.
    PF00072. Response_reg. 1 hit.
    [Graphical view]
    SMARTiSM00448. REC. 1 hit.
    [Graphical view]
    SUPFAMiSSF52172. SSF52172. 1 hit.
    PROSITEiPS51017. CCT. 1 hit.
    PS50110. RESPONSE_REGULATORY. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    A2XFB7-1 [UniParc]FASTAAdd to Basket

    « Hide

    MGSACEAGTD EPSRDDVKGT GNGILENGHS HKSEEEEWRN GMGEDLPNGH    50
    STPPEPQQTD EQKEHQVRIV RWERFLPVKT LRVLLVENDD STRQVVSALL 100
    RKCCYEVIPA ENGLHAWQCL EDLQNHIDLV LTEVVMPRLS GIGLLSKITS 150
    HKICKDIPVI MMSSNDSMGT VFKCLSKGAV DFLVKPIRKN ELKNLWQHVW 200
    RRCHSSSGSG SESGIRTQKC TKPKVDDEYE NNSGSNNDNE DDDDNDEDDD 250
    DLSVGHNARD GSDNGSGTQS SWTKRAVEID SPQQMSPDQP SDLPDSTCAQ 300
    VIHPTSEICS NRWLPTANKR SGKKHKENND DSMGKYLEIG APRNSSMEYQ 350
    SSPREMSVNP TEKQHETLMP QSKTTRETDS RNTQNEPTTQ TVDLISSIAR 400
    STDDKQVVRI NNAPDCSSKV PDGNDKNRDS LIDMTSEELG LKRLKTTGSA 450
    TEIHDERNIL KRSDLSAFTR YHTTVASNQG GAGFGGSCSP QDNSSEALKT 500
    DSNCKVKSNS DAAEIKQGSN GSSNNNDMGS STKNAITKPS SNRGKVISPS 550
    AVKATQHTSA FHPVQRQTSP ANVVGKDKVD EGIANGVNVG HPVDVQNSFM 600
    QHHHHVHYYV HVMTQQQQQP SIERGSSDAQ CGSSNVFDPP IEGHAANYSV 650
    NGSFSGGHNG NNGQRGPSTA PNVGRPNMET VNGIVDENGA GGGNGSGSGS 700
    GNDLYQNGVC YREAALNKFR QKRKVRNFGK KVRYQSRKRL AEQRPRIRGQ 750
    FVRQSGQEDQ AGQDEDR 767
    Length:767
    Mass (Da):84,097
    Last modified:September 11, 2007 - v2
    Checksum:i7E1427881B30CA37
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Sequence conflicti33 – 331S → P in BAD38859. (PubMed:15725670)Curated

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AB189043 mRNA. Translation: BAD38859.1.
    CM000128 Genomic DNA. No translation available.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AB189043 mRNA. Translation: BAD38859.1 .
    CM000128 Genomic DNA. No translation available.

    3D structure databases

    ProteinModelPortali A2XFB7.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 39946.BGIOSIBCE010643.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Organism-specific databases

    Gramenei A2XFB7.

    Phylogenomic databases

    eggNOGi COG0784.
    HOGENOMi HOG000034018.

    Family and domain databases

    InterProi IPR010402. CCT_domain.
    IPR011006. CheY-like_superfamily.
    IPR001789. Sig_transdc_resp-reg_receiver.
    [Graphical view ]
    Pfami PF06203. CCT. 1 hit.
    PF00072. Response_reg. 1 hit.
    [Graphical view ]
    SMARTi SM00448. REC. 1 hit.
    [Graphical view ]
    SUPFAMi SSF52172. SSF52172. 1 hit.
    PROSITEi PS51017. CCT. 1 hit.
    PS50110. RESPONSE_REGULATORY. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Circadian-associated rice pseudo response regulators (OsPRRs): insight into the control of flowering time."
      Murakami M., Matsushika A., Ashikari M., Yamashino T., Mizuno T.
      Biosci. Biotechnol. Biochem. 69:410-414(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [MRNA], INDUCTION.
      Strain: cv. Kasalath.
    2. "The genomes of Oryza sativa: a history of duplications."
      Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S., Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.
      , Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J., Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X., Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y., Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L., Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H., Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z., Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L., Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F., Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M., McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.
      PLoS Biol. 3:266-281(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. 93-11.

    Entry informationi

    Entry nameiPRR73_ORYSI
    AccessioniPrimary (citable) accession number: A2XFB7
    Secondary accession number(s): Q689G4, Q689G7, Q8H8T5
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: September 11, 2007
    Last sequence update: September 11, 2007
    Last modified: October 1, 2014
    This is version 34 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Caution

    Lacks the phospho-accepting Asp (here Glu-133), present in the receiver domain, which is one of the conserved features of two-component response regulators (ARRs) family.Curated

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3