Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

A2WL56

- A2WL56_ORYSI

UniProt

A2WL56 - A2WL56_ORYSI

Protein
Submitted name:

Putative uncharacterized protein

Gene

OsI_00569

Organism
Oryza sativa subsp. indica (Rice)
Status
Unreviewed - Annotation score: 2 out of 5- Protein predictedi
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 34 (01 Oct 2014)
      Sequence version 1 (20 Mar 2007)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    GO - Molecular functioni

    1. carbon-sulfur lyase activity Source: InterPro
    2. pyridoxal phosphate binding Source: InterPro

    GO - Biological processi

    1. cotyledon development Source: EnsemblPlants/Gramene
    2. cotyledon vascular tissue pattern formation Source: EnsemblPlants/Gramene
    3. defense response to bacterium Source: EnsemblPlants/Gramene
    4. gynoecium development Source: EnsemblPlants/Gramene
    5. indoleacetic acid biosynthetic process Source: EnsemblPlants/Gramene
    6. maintenance of root meristem identity Source: EnsemblPlants/Gramene
    7. phloem or xylem histogenesis Source: EnsemblPlants/Gramene
    8. positive gravitropism Source: EnsemblPlants/Gramene
    9. primary root development Source: EnsemblPlants/Gramene
    10. response to ethylene Source: EnsemblPlants/Gramene

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative uncharacterized proteinImported
    Gene namesi
    ORF Names:OsI_00569Imported
    OrganismiOryza sativa subsp. indica (Rice)Imported
    Taxonomic identifieri39946 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza

    Organism-specific databases

    GrameneiA2WL56.

    Interactioni

    Protein-protein interaction databases

    STRINGi39947.LOC_Os01g07500.1.

    Structurei

    3D structure databases

    ProteinModelPortaliA2WL56.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiNOG331832.
    HOGENOMiHOG000237549.

    Family and domain databases

    Gene3Di2.10.25.30. 1 hit.
    3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProiIPR006948. Alliinase_C.
    IPR006947. EGF_alliinase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view]
    PfamiPF04864. Alliinase_C. 1 hit.
    [Graphical view]
    SUPFAMiSSF53383. SSF53383. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    A2WL56-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAALRVGTRA VEGRFQASNG GGGGGGGMAP SSRLFAAHRE AKPRSSHSAA    50
    PWKLPRRRAG AMPLWRVAVF ASVALNVATL ALLLHHYATS PPPHHHHHDA 100
    GLATRSSDAA VHRRARTASS MAPSTGKPAV TTDSVINLDH GDPTMFEEFW 150
    RETGDAAEVV IPGWQTMSYF SDVTNVCWFL EPELDRQVRR LHRVVGNAAV 200
    DGYHVLVGTG STQLFMAALY ALAPDAAAAA AGEPISVVST APYYSSYPAV 250
    TDFLRSGLFR WAGDADAFKG DSYIELVCSP NNPDGAIREA VLDPKTGNGR 300
    TVHDLAYYWP QYTPITKRAS HDIMLFTVSK STGHAGTRIG WALVKDRAIA 350
    RKMTKFVELN TIGVSKDSQM RAAKVLAAVS DGYERRPEQT KETMTTPLRL 400
    FDFGRRKMVE RWSMLRAAAA ASGIFSLPEE TSGFCNFTKE TAATNPAFAW 450
    LRCDREDVED CAGFLRGHKI LTRSGAQFGA DARYVRVSML DRDDAFDIFI 500
    NRLSSLK 507
    Length:507
    Mass (Da):55,308
    Last modified:March 20, 2007 - v1
    Checksum:iB9B0602C3A5DBDB2
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CM000126 Genomic DNA. Translation: EAY72702.1.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CM000126 Genomic DNA. Translation: EAY72702.1 .

    3D structure databases

    ProteinModelPortali A2WL56.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 39947.LOC_Os01g07500.1.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Organism-specific databases

    Gramenei A2WL56.

    Phylogenomic databases

    eggNOGi NOG331832.
    HOGENOMi HOG000237549.

    Family and domain databases

    Gene3Di 2.10.25.30. 1 hit.
    3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProi IPR006948. Alliinase_C.
    IPR006947. EGF_alliinase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view ]
    Pfami PF04864. Alliinase_C. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53383. SSF53383. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "The genomes of Oryza sativa: a history of duplications."
      Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S., Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.
      , Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J., Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X., Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y., Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L., Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H., Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z., Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L., Fang L., Lei T., Chen C., Chen H., Xu Z., Li H., Huang H., Zhang F., Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L., Zheng W., Hao B., Liu S., Wang W., Yuan L., Cao M., McDermott J., Samudrala R., Wang J., Wong G.K., Yang H.
      PLoS Biol. 3:266-281(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
    2. "Improved gene annotation of the rice (Oryza sativa) genomes."
      Wang J., Li R., Fan W., Huang Q., Zhang J., Zhou Y., Hu Y., Zi S., Li J., Ni P., Zheng H., Zhang Y., Zhao M., Hao Q., McDermott J., Samudrala R., Kristiansen K., Wong G.K.-S.
      Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
    3. Cited for: NUCLEOTIDE SEQUENCE.

    Entry informationi

    Entry nameiA2WL56_ORYSI
    AccessioniPrimary (citable) accession number: A2WL56
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 20, 2007
    Last sequence update: March 20, 2007
    Last modified: October 1, 2014
    This is version 34 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)