Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

GATA zinc finger domain-containing protein 1

Gene

GATAD1

Organism
Bos taurus (Bovine)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri9 – 33GATA-typePROSITE-ProRule annotationAdd BLAST25

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Recommended name:
GATA zinc finger domain-containing protein 1
Gene namesi
Name:GATAD1
OrganismiBos taurus (Bovine)
Taxonomic identifieri9913 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaRuminantiaPecoraBovidaeBovinaeBos
Proteomesi
  • UP000009136 Componenti: Chromosome 4

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002889081 – 272GATA zinc finger domain-containing protein 1Add BLAST272

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei167N6-acetyllysineBy similarity1
Cross-linki265Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2)By similarity

Keywords - PTMi

Acetylation, Isopeptide bond, Ubl conjugation

Proteomic databases

PaxDbiA2VDY6.

Expressioni

Gene expression databases

BgeeiENSBTAG00000021996.

Interactioni

Protein-protein interaction databases

STRINGi9913.ENSBTAP00000029332.

Family & Domainsi

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Compositional biasi35 – 84Gly-richAdd BLAST50

Zinc finger

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri9 – 33GATA-typePROSITE-ProRule annotationAdd BLAST25

Keywords - Domaini

Zinc-finger

Phylogenomic databases

eggNOGiENOG410IGNZ. Eukaryota.
ENOG410XR16. LUCA.
GeneTreeiENSGT00390000018554.
HOGENOMiHOG000039281.
HOVERGENiHBG067032.
InParanoidiA2VDY6.
OMAiYIVGPEE.
OrthoDBiEOG091G0KSX.
TreeFamiTF325354.

Family and domain databases

Gene3Di3.30.50.10. 1 hit.
InterProiView protein in InterPro
IPR000679. Znf_GATA.
IPR013088. Znf_NHR/GATA.
PROSITEiView protein in PROSITE
PS50114. GATA_ZN_FINGER_2. 1 hit.

Sequencei

Sequence statusi: Complete.

A2VDY6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPLGLKPTCS VCKTTSSSMW KKGPQGEILC HHCTGRGGAG GGGSCPGAAG
60 70 80 90 100
GTGGGGGGTG GGFGAATFAS TSAAPPQSNG GGGGKQSKQE IHRRSARLRN
110 120 130 140 150
TKYKSAPAAE KKVSTKGKGR RHIFKLKNPI KAPESVSTII TAESIFYKGV
160 170 180 190 200
YYQIGDVVSV IDEQDGKPYY AQIRGFVQDQ YCEKSAALTW LIPTLASPRD
210 220 230 240 250
QFDPASYIVG PEEDLPRKME YLEFVCHAPS EYFKSRSSPF PTVPTRPEKG
260 270
YIWTHVGPTP AITIKETVAN HL
Length:272
Mass (Da):28,884
Last modified:March 20, 2007 - v1
Checksum:i5F7534438CCDF653
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC133475 mRNA. Translation: AAI33476.1.
RefSeqiNP_001075092.1. NM_001081623.2.
UniGeneiBt.64804.

Genome annotation databases

EnsembliENSBTAT00000029332; ENSBTAP00000029332; ENSBTAG00000021996.
GeneIDi784921.
KEGGibta:784921.

Similar proteinsi

Entry informationi

Entry nameiGATA1_BOVIN
AccessioniPrimary (citable) accession number: A2VDY6
Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 29, 2007
Last sequence update: March 20, 2007
Last modified: August 30, 2017
This is version 59 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome