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Protein

GATA zinc finger domain-containing protein 1

Gene

GATAD1

Organism
Bos taurus (Bovine)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Zinc fingeri9 – 3325GATA-typePROSITE-ProRule annotationAdd
BLAST

GO - Molecular functioni

Complete GO annotation...

Keywords - Ligandi

Metal-binding, Zinc

Names & Taxonomyi

Protein namesi
Recommended name:
GATA zinc finger domain-containing protein 1
Gene namesi
Name:GATAD1
OrganismiBos taurus (Bovine)
Taxonomic identifieri9913 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaRuminantiaPecoraBovidaeBovinaeBos
Proteomesi
  • UP000009136 Componenti: Chromosome 4

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 272272GATA zinc finger domain-containing protein 1PRO_0000288908Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei167 – 1671N6-acetyllysineBy similarity
Cross-linki265 – 265Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2)By similarity

Keywords - PTMi

Acetylation, Isopeptide bond, Ubl conjugation

Proteomic databases

PaxDbiA2VDY6.

Interactioni

Protein-protein interaction databases

STRINGi9913.ENSBTAP00000029332.

Family & Domainsi

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi35 – 8450Gly-richAdd
BLAST

Sequence similaritiesi

Contains 1 GATA-type zinc finger.PROSITE-ProRule annotation

Zinc finger

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Zinc fingeri9 – 3325GATA-typePROSITE-ProRule annotationAdd
BLAST

Keywords - Domaini

Zinc-finger

Phylogenomic databases

eggNOGiENOG410IGNZ. Eukaryota.
ENOG410XR16. LUCA.
GeneTreeiENSGT00390000018554.
HOGENOMiHOG000039281.
HOVERGENiHBG067032.
InParanoidiA2VDY6.
OMAiQGEILCN.
OrthoDBiEOG7Q2N6N.
TreeFamiTF325354.

Family and domain databases

Gene3Di3.30.50.10. 1 hit.
InterProiIPR000679. Znf_GATA.
IPR013088. Znf_NHR/GATA.
[Graphical view]
PROSITEiPS50114. GATA_ZN_FINGER_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A2VDY6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPLGLKPTCS VCKTTSSSMW KKGPQGEILC HHCTGRGGAG GGGSCPGAAG
60 70 80 90 100
GTGGGGGGTG GGFGAATFAS TSAAPPQSNG GGGGKQSKQE IHRRSARLRN
110 120 130 140 150
TKYKSAPAAE KKVSTKGKGR RHIFKLKNPI KAPESVSTII TAESIFYKGV
160 170 180 190 200
YYQIGDVVSV IDEQDGKPYY AQIRGFVQDQ YCEKSAALTW LIPTLASPRD
210 220 230 240 250
QFDPASYIVG PEEDLPRKME YLEFVCHAPS EYFKSRSSPF PTVPTRPEKG
260 270
YIWTHVGPTP AITIKETVAN HL
Length:272
Mass (Da):28,884
Last modified:March 20, 2007 - v1
Checksum:i5F7534438CCDF653
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC133475 mRNA. Translation: AAI33476.1.
RefSeqiNP_001075092.1. NM_001081623.2.
UniGeneiBt.64804.

Genome annotation databases

EnsembliENSBTAT00000029332; ENSBTAP00000029332; ENSBTAG00000021996.
GeneIDi784921.
KEGGibta:784921.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC133475 mRNA. Translation: AAI33476.1.
RefSeqiNP_001075092.1. NM_001081623.2.
UniGeneiBt.64804.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9913.ENSBTAP00000029332.

Proteomic databases

PaxDbiA2VDY6.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSBTAT00000029332; ENSBTAP00000029332; ENSBTAG00000021996.
GeneIDi784921.
KEGGibta:784921.

Organism-specific databases

CTDi57798.

Phylogenomic databases

eggNOGiENOG410IGNZ. Eukaryota.
ENOG410XR16. LUCA.
GeneTreeiENSGT00390000018554.
HOGENOMiHOG000039281.
HOVERGENiHBG067032.
InParanoidiA2VDY6.
OMAiQGEILCN.
OrthoDBiEOG7Q2N6N.
TreeFamiTF325354.

Miscellaneous databases

NextBioi20926976.

Family and domain databases

Gene3Di3.30.50.10. 1 hit.
InterProiIPR000679. Znf_GATA.
IPR013088. Znf_NHR/GATA.
[Graphical view]
PROSITEiPS50114. GATA_ZN_FINGER_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. NIH - Mammalian Gene Collection (MGC) project
    Submitted (FEB-2007) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: Hereford.
    Tissue: Placenta.

Entry informationi

Entry nameiGATA1_BOVIN
AccessioniPrimary (citable) accession number: A2VDY6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 29, 2007
Last sequence update: March 20, 2007
Last modified: February 17, 2016
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.