A2VDJ6 (A2VDJ6_HUMAN) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
ZNF568 protein EMBL AAI31548.1

Gene names

Name:

ZNF568 EMBL AAI31548.1

Organism

Homo sapiens (Human) EMBL AAI31548.1

Taxonomic identifier

9606 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Euarchontoglires › Primates › Haplorrhini › Simiiformes › Catarrhini › Hominoidea › Hominidae › Homininae › Homo

Protein attributes

Sequence length	502 AA.
Sequence status	Fragment.
Protein existence	Evidence at transcript level

Ontologies

Keywords
Domain	Repeat SAAS SAAS001909 Zinc-finger SAAS SAAS001909
Ligand	Metal-binding Zinc
Gene Ontology (GO)
Biological_process	regulation of transcription, DNA-dependent Inferred from electronic annotation. Source: InterPro
Cellular_component	intracellular Inferred from electronic annotation. Source: InterPro
Molecular_function	nucleic acid binding Inferred from electronic annotation. Source: InterPro zinc ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	502	1	EMBL AAI31548.1

Sequences

	Sequence		Length	Mass (Da)
	A2VDJ6 [UniParc]. Last modified March 20, 2007. Version 1. Checksum: 54C403A6E63FC76F	FASTA	502	58,267
	10 20 30 40 50 60 MTSQSSVISN SCVTMERLSH MMERKAWCSQ ESALSEEEED TTRPLETVTF KDVAVDLTQE 70 80 90 100 110 120 EWEQMKPAQR NLYRDVMLEN YSNLVTVGCQ VTKPDVIFKL EQEEEPWVME EEMFGRHCPV 130 140 150 160 170 180 WEVDEQIKKQ QETLVRKVTS ISKKILIKEK VIECKKVAKI FPLSSDIVTS RQSFYDCDSL 190 200 210 220 230 240 DKGLEHNLDL LRYEKGCVRE KQSNEFGKPF YHCASYVVTP FKCNQCGQDF SHKFDLIRHE 250 260 270 280 290 300 RIHAGEKPYE CKECGKAFSR KENLITHQKI HTGEKPYKCN ECGKAFIQMS NLIRHHRIHT 310 320 330 340 350 360 GEKPYACKDC WKAFSQKSNL IEHERIHTGE KPYECKECGK SFSQKQNLIE HEKIHTGEKP 370 380 390 400 410 420 YACNECGRAF SRMSSVTLHM RSHTGEKPYK CNKCGKAFSQ CSVFIIHMRS HTGEKPYVCS 430 440 450 460 470 480 ECGKAFSQSS SLTVHMRNHT AEKPYECKEC GKAFSRKENL ITHQKIHTGE KPYECSECGK 490 500 AFIQMSNLIR HQRIHTGEKP YA

References

[1]

"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M. , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J. Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: PCR rescued clones EMBL AAI31548.1.

+

Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BC131547 mRNA. Translation: AAI31548.1.
IPI	IPI01018089.
RefSeq	NP_001191764.1. NM_001204835.1.
UniGene	Hs.404220. Hs.733385.
3D structure databases
ProteinModelPortal	A2VDJ6.
ModBase	Search...
Protein-protein interaction databases
IntAct	A2VDJ6. 1 interaction.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	374900.
KEGG	hsa:374900.
Organism-specific databases
CTD	374900.
Phylogenomic databases
HOVERGEN	HBG018163.
KO	K09228.
Gene expression databases
ArrayExpress	A2VDJ6.
Bgee	A2VDJ6.
Family and domain databases
Gene3D	3.30.160.60. 10 hits.
InterPro	IPR001909. Krueppel-associated_box. IPR007087. Znf_C2H2. IPR015880. Znf_C2H2-like. IPR013087. Znf_C2H2/integrase_DNA-bd. [Graphical view]
Pfam	PF01352. KRAB. 1 hit. [Graphical view]
SMART	SM00349. KRAB. 1 hit. SM00355. ZnF_C2H2. 10 hits. [Graphical view]
SUPFAM	SSF109640. Krueppel-associated_box. 1 hit.
PROSITE	PS50805. KRAB. 1 hit. PS00028. ZINC_FINGER_C2H2_1. 10 hits. PS50157. ZINC_FINGER_C2H2_2. 10 hits. [Graphical view]
ProtoNet	Search...
Other
GenomeRNAi	374900.
NextBio	100325.

Entry information

Entry name

A2VDJ6_HUMAN

Accession

Primary (citable) accession number: A2VDJ6

Entry history

Integrated into UniProtKB/TrEMBL:	March 20, 2007
Last sequence update:	March 20, 2007
Last modified:	April 3, 2013
This is version 56 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

Disclaimer

Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.