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A2VDJ6 (A2VDJ6_HUMAN) Unreviewed, UniProtKB/TrEMBL

Last modified March 19, 2014. Version 61. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:ZNF568 EMBL AAI31548.1
OrganismHomo sapiens (Human) EMBL AAI31548.1
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Protein attributes

Sequence length502 AA.
Sequence statusFragment.
Protein existenceEvidence at transcript level

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue5021 EMBL AAI31548.1

Sequences

Sequence LengthMass (Da)Tools
A2VDJ6 [UniParc].

Last modified March 20, 2007. Version 1.
Checksum: 54C403A6E63FC76F

FASTA50258,267
        10         20         30         40         50         60 
MTSQSSVISN SCVTMERLSH MMERKAWCSQ ESALSEEEED TTRPLETVTF KDVAVDLTQE 

        70         80         90        100        110        120 
EWEQMKPAQR NLYRDVMLEN YSNLVTVGCQ VTKPDVIFKL EQEEEPWVME EEMFGRHCPV 

       130        140        150        160        170        180 
WEVDEQIKKQ QETLVRKVTS ISKKILIKEK VIECKKVAKI FPLSSDIVTS RQSFYDCDSL 

       190        200        210        220        230        240 
DKGLEHNLDL LRYEKGCVRE KQSNEFGKPF YHCASYVVTP FKCNQCGQDF SHKFDLIRHE 

       250        260        270        280        290        300 
RIHAGEKPYE CKECGKAFSR KENLITHQKI HTGEKPYKCN ECGKAFIQMS NLIRHHRIHT 

       310        320        330        340        350        360 
GEKPYACKDC WKAFSQKSNL IEHERIHTGE KPYECKECGK SFSQKQNLIE HEKIHTGEKP 

       370        380        390        400        410        420 
YACNECGRAF SRMSSVTLHM RSHTGEKPYK CNKCGKAFSQ CSVFIIHMRS HTGEKPYVCS 

       430        440        450        460        470        480 
ECGKAFSQSS SLTVHMRNHT AEKPYECKEC GKAFSRKENL ITHQKIHTGE KPYECSECGK 

       490        500 
AFIQMSNLIR HQRIHTGEKP YA 

« Hide

References

[1]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M. expand/collapse author list , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BC131547 mRNA. Translation: AAI31548.1.
RefSeqNP_001191764.1. NM_001204835.1.
UniGeneHs.404220.
Hs.733385.

3D structure databases

ProteinModelPortalA2VDJ6.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

IntActA2VDJ6. 1 interaction.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID374900.
KEGGhsa:374900.

Organism-specific databases

CTD374900.

Phylogenomic databases

HOVERGENHBG018163.
KOK09228.

Gene expression databases

ArrayExpressA2VDJ6.
BgeeA2VDJ6.

Family and domain databases

Gene3D3.30.160.60. 10 hits.
InterProIPR001909. Krueppel-associated_box.
IPR007087. Znf_C2H2.
IPR015880. Znf_C2H2-like.
IPR013087. Znf_C2H2/integrase_DNA-bd.
[Graphical view]
PfamPF01352. KRAB. 1 hit.
[Graphical view]
SMARTSM00349. KRAB. 1 hit.
SM00355. ZnF_C2H2. 10 hits.
[Graphical view]
SUPFAMSSF109640. SSF109640. 1 hit.
PROSITEPS50805. KRAB. 1 hit.
PS00028. ZINC_FINGER_C2H2_1. 10 hits.
PS50157. ZINC_FINGER_C2H2_2. 10 hits.
[Graphical view]
ProtoNetSearch...

Other

GenomeRNAi374900.
NextBio100325.

Entry information

Entry nameA2VDJ6_HUMAN
AccessionPrimary (citable) accession number: A2VDJ6
Entry history
Integrated into UniProtKB/TrEMBL: March 20, 2007
Last sequence update: March 20, 2007
Last modified: March 19, 2014
This is version 61 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.