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A2VDJ6

- A2VDJ6_HUMAN

UniProt

A2VDJ6 - A2VDJ6_HUMAN

Protein
Submitted name:

ZNF568 protein

Gene

ZNF568

Organism
Homo sapiens (Human)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 62 (01 Oct 2014)
      Sequence version 1 (20 Mar 2007)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. metal ion binding Source: UniProtKB-KW
    2. nucleic acid binding Source: InterPro

    GO - Biological processi

    1. regulation of transcription, DNA-templated Source: InterPro

    Keywords - Ligandi

    Metal-binding, Zinc

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ZNF568 proteinImported
    Gene namesi
    Name:ZNF568Imported
    OrganismiHomo sapiens (Human)Imported
    Taxonomic identifieri9606 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

    Subcellular locationi

    GO - Cellular componenti

    1. intracellular Source: InterPro

    Expressioni

    Gene expression databases

    ArrayExpressiA2VDJ6.
    BgeeiA2VDJ6.

    Interactioni

    Protein-protein interaction databases

    IntActiA2VDJ6. 1 interaction.

    Structurei

    3D structure databases

    ProteinModelPortaliA2VDJ6.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Keywords - Domaini

    RepeatSAAS annotation, Zinc-fingerSAAS annotation

    Phylogenomic databases

    HOVERGENiHBG018163.
    KOiK09228.

    Family and domain databases

    Gene3Di3.30.160.60. 10 hits.
    InterProiIPR001909. Krueppel-associated_box.
    IPR007087. Znf_C2H2.
    IPR015880. Znf_C2H2-like.
    IPR013087. Znf_C2H2/integrase_DNA-bd.
    [Graphical view]
    PfamiPF01352. KRAB. 1 hit.
    [Graphical view]
    SMARTiSM00349. KRAB. 1 hit.
    SM00355. ZnF_C2H2. 10 hits.
    [Graphical view]
    SUPFAMiSSF109640. SSF109640. 1 hit.
    PROSITEiPS50805. KRAB. 1 hit.
    PS00028. ZINC_FINGER_C2H2_1. 10 hits.
    PS50157. ZINC_FINGER_C2H2_2. 10 hits.
    [Graphical view]

    Sequencei

    Sequence statusi: Fragment.

    A2VDJ6-1 [UniParc]FASTAAdd to Basket

    « Hide

    MTSQSSVISN SCVTMERLSH MMERKAWCSQ ESALSEEEED TTRPLETVTF    50
    KDVAVDLTQE EWEQMKPAQR NLYRDVMLEN YSNLVTVGCQ VTKPDVIFKL 100
    EQEEEPWVME EEMFGRHCPV WEVDEQIKKQ QETLVRKVTS ISKKILIKEK 150
    VIECKKVAKI FPLSSDIVTS RQSFYDCDSL DKGLEHNLDL LRYEKGCVRE 200
    KQSNEFGKPF YHCASYVVTP FKCNQCGQDF SHKFDLIRHE RIHAGEKPYE 250
    CKECGKAFSR KENLITHQKI HTGEKPYKCN ECGKAFIQMS NLIRHHRIHT 300
    GEKPYACKDC WKAFSQKSNL IEHERIHTGE KPYECKECGK SFSQKQNLIE 350
    HEKIHTGEKP YACNECGRAF SRMSSVTLHM RSHTGEKPYK CNKCGKAFSQ 400
    CSVFIIHMRS HTGEKPYVCS ECGKAFSQSS SLTVHMRNHT AEKPYECKEC 450
    GKAFSRKENL ITHQKIHTGE KPYECSECGK AFIQMSNLIR HQRIHTGEKP 500
    YA 502
    Length:502
    Mass (Da):58,267
    Last modified:March 20, 2007 - v1
    Checksum:i54C403A6E63FC76F
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Non-terminal residuei502 – 5021Imported

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BC131547 mRNA. Translation: AAI31548.1.
    RefSeqiNP_001191764.1. NM_001204835.1.
    UniGeneiHs.404220.
    Hs.733385.

    Genome annotation databases

    GeneIDi374900.
    KEGGihsa:374900.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BC131547 mRNA. Translation: AAI31548.1 .
    RefSeqi NP_001191764.1. NM_001204835.1.
    UniGenei Hs.404220.
    Hs.733385.

    3D structure databases

    ProteinModelPortali A2VDJ6.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    IntActi A2VDJ6. 1 interaction.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 374900.
    KEGGi hsa:374900.

    Organism-specific databases

    CTDi 374900.

    Phylogenomic databases

    HOVERGENi HBG018163.
    KOi K09228.

    Miscellaneous databases

    GenomeRNAii 374900.
    NextBioi 100325.

    Gene expression databases

    ArrayExpressi A2VDJ6.
    Bgeei A2VDJ6.

    Family and domain databases

    Gene3Di 3.30.160.60. 10 hits.
    InterProi IPR001909. Krueppel-associated_box.
    IPR007087. Znf_C2H2.
    IPR015880. Znf_C2H2-like.
    IPR013087. Znf_C2H2/integrase_DNA-bd.
    [Graphical view ]
    Pfami PF01352. KRAB. 1 hit.
    [Graphical view ]
    SMARTi SM00349. KRAB. 1 hit.
    SM00355. ZnF_C2H2. 10 hits.
    [Graphical view ]
    SUPFAMi SSF109640. SSF109640. 1 hit.
    PROSITEi PS50805. KRAB. 1 hit.
    PS00028. ZINC_FINGER_C2H2_1. 10 hits.
    PS50157. ZINC_FINGER_C2H2_2. 10 hits.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
      The MGC Project Team
      Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M.
      , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
      Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].

    Entry informationi

    Entry nameiA2VDJ6_HUMAN
    AccessioniPrimary (citable) accession number: A2VDJ6
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 20, 2007
    Last sequence update: March 20, 2007
    Last modified: October 1, 2014
    This is version 62 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)
    DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.