Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

A2VDJ6

- A2VDJ6_HUMAN

UniProt

A2VDJ6 - A2VDJ6_HUMAN

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein
Submitted name:

ZNF568 protein

Gene

ZNF568

Organism
Homo sapiens (Human)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. metal ion binding Source: UniProtKB-KW
  2. nucleic acid binding Source: InterPro

GO - Biological processi

  1. regulation of transcription, DNA-templated Source: InterPro
Complete GO annotation...

Keywords - Ligandi

Metal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
ZNF568 proteinImported
Gene namesi
Name:ZNF568Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Subcellular locationi

GO - Cellular componenti

  1. intracellular Source: InterPro
Complete GO annotation...

Expressioni

Gene expression databases

BgeeiA2VDJ6.
ExpressionAtlasiA2VDJ6. baseline and differential.

Interactioni

Protein-protein interaction databases

IntActiA2VDJ6. 1 interaction.

Structurei

3D structure databases

ProteinModelPortaliA2VDJ6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

RepeatSAAS annotation, Zinc-fingerSAAS annotation

Phylogenomic databases

HOVERGENiHBG018163.
KOiK09228.

Family and domain databases

Gene3Di3.30.160.60. 10 hits.
InterProiIPR001909. Krueppel-associated_box.
IPR007087. Znf_C2H2.
IPR015880. Znf_C2H2-like.
IPR013087. Znf_C2H2/integrase_DNA-bd.
[Graphical view]
PfamiPF01352. KRAB. 1 hit.
[Graphical view]
SMARTiSM00349. KRAB. 1 hit.
SM00355. ZnF_C2H2. 10 hits.
[Graphical view]
SUPFAMiSSF109640. SSF109640. 1 hit.
PROSITEiPS50805. KRAB. 1 hit.
PS00028. ZINC_FINGER_C2H2_1. 10 hits.
PS50157. ZINC_FINGER_C2H2_2. 10 hits.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

A2VDJ6-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MTSQSSVISN SCVTMERLSH MMERKAWCSQ ESALSEEEED TTRPLETVTF
60 70 80 90 100
KDVAVDLTQE EWEQMKPAQR NLYRDVMLEN YSNLVTVGCQ VTKPDVIFKL
110 120 130 140 150
EQEEEPWVME EEMFGRHCPV WEVDEQIKKQ QETLVRKVTS ISKKILIKEK
160 170 180 190 200
VIECKKVAKI FPLSSDIVTS RQSFYDCDSL DKGLEHNLDL LRYEKGCVRE
210 220 230 240 250
KQSNEFGKPF YHCASYVVTP FKCNQCGQDF SHKFDLIRHE RIHAGEKPYE
260 270 280 290 300
CKECGKAFSR KENLITHQKI HTGEKPYKCN ECGKAFIQMS NLIRHHRIHT
310 320 330 340 350
GEKPYACKDC WKAFSQKSNL IEHERIHTGE KPYECKECGK SFSQKQNLIE
360 370 380 390 400
HEKIHTGEKP YACNECGRAF SRMSSVTLHM RSHTGEKPYK CNKCGKAFSQ
410 420 430 440 450
CSVFIIHMRS HTGEKPYVCS ECGKAFSQSS SLTVHMRNHT AEKPYECKEC
460 470 480 490 500
GKAFSRKENL ITHQKIHTGE KPYECSECGK AFIQMSNLIR HQRIHTGEKP

YA
Length:502
Mass (Da):58,267
Last modified:March 20, 2007 - v1
Checksum:i54C403A6E63FC76F
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei502 – 5021Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC131547 mRNA. Translation: AAI31548.1.
RefSeqiNP_001191764.1. NM_001204835.1.
UniGeneiHs.404220.
Hs.733385.

Genome annotation databases

GeneIDi374900.
KEGGihsa:374900.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC131547 mRNA. Translation: AAI31548.1 .
RefSeqi NP_001191764.1. NM_001204835.1.
UniGenei Hs.404220.
Hs.733385.

3D structure databases

ProteinModelPortali A2VDJ6.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

IntActi A2VDJ6. 1 interaction.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 374900.
KEGGi hsa:374900.

Organism-specific databases

CTDi 374900.

Phylogenomic databases

HOVERGENi HBG018163.
KOi K09228.

Miscellaneous databases

GenomeRNAii 374900.
NextBioi 100325.

Gene expression databases

Bgeei A2VDJ6.
ExpressionAtlasi A2VDJ6. baseline and differential.

Family and domain databases

Gene3Di 3.30.160.60. 10 hits.
InterProi IPR001909. Krueppel-associated_box.
IPR007087. Znf_C2H2.
IPR015880. Znf_C2H2-like.
IPR013087. Znf_C2H2/integrase_DNA-bd.
[Graphical view ]
Pfami PF01352. KRAB. 1 hit.
[Graphical view ]
SMARTi SM00349. KRAB. 1 hit.
SM00355. ZnF_C2H2. 10 hits.
[Graphical view ]
SUPFAMi SSF109640. SSF109640. 1 hit.
PROSITEi PS50805. KRAB. 1 hit.
PS00028. ZINC_FINGER_C2H2_1. 10 hits.
PS50157. ZINC_FINGER_C2H2_2. 10 hits.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M.
    , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].

Entry informationi

Entry nameiA2VDJ6_HUMAN
AccessioniPrimary (citable) accession number: A2VDJ6
Entry historyi
Integrated into UniProtKB/TrEMBL: March 20, 2007
Last sequence update: March 20, 2007
Last modified: October 29, 2014
This is version 63 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.