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Protein

Tetratricopeptide repeat protein 38

Gene

ttc38

Organism
Xenopus laevis (African clawed frog)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Tetratricopeptide repeat protein 38
Short name:
TPR repeat protein 38
Gene namesi
Name:ttc38
OrganismiXenopus laevis (African clawed frog)
Taxonomic identifieri8355 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusXenopus

Organism-specific databases

XenbaseiXB-GENE-5833300. ttc38.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003215341 – 469Tetratricopeptide repeat protein 38Add BLAST469

Proteomic databases

MaxQBiA2VD82.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Repeati107 – 140TPR 1Add BLAST34
Repeati179 – 212TPR 2Add BLAST34
Repeati251 – 284TPR 3Add BLAST34

Sequence similaritiesi

Belongs to the TTC38 family.Curated

Keywords - Domaini

Repeat, TPR repeat

Phylogenomic databases

HOVERGENiHBG108613.

Family and domain databases

CDDicd05804. StaR_like. 1 hit.
Gene3Di1.25.40.10. 1 hit.
InterProiView protein in InterPro
IPR011990. TPR-like_helical_dom_sf.
IPR033891. TTC38.
PANTHERiPTHR16263. PTHR16263. 1 hit.
SUPFAMiSSF48452. SSF48452. 1 hit.

Sequencei

Sequence statusi: Complete.

A2VD82-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAPLSLRDCK AWQDAGLTLS TTSNEVCKLF DATLIQYATW KNDSTLGGIE
60 70 80 90 100
GCLSRINNTD PNFVMGHVAA NGLELIGTGR SPLVDKELDD ALKTMSDLSK
110 120 130 140 150
SQALTEREKL HVAAVETFAD GNLPKAADLW ERILQSHPTD LLALKFAHDC
160 170 180 190 200
YFYLGEQRQM RDSVARVLPY WKPETPLSSY VKGMYSFGLL ETNFYDQALK
210 220 230 240 250
VAKEALAVER TDSWSVHTIA HVHEMKADLD SGLSFMQETE NNWKGSDMLA
260 270 280 290 300
CHVYWHWALY LIEKGDYEAA LTLYDNHIAP QCFASGSMLD VVDNSSMLYR
310 320 330 340 350
LQMEGVNVGD RWKNLVQITK KHTKDHMLIF NDLHFLMSSL GSKDEDTTRQ
360 370 380 390 400
LVESMQELSK SPGEKQQHSL IKHLGAPLCQ ALIEYNGGNY DKAVDLIYPI
410 420 430 440 450
RYQILKIGGS DAQRDLFNQV LIQAAINSDS THHQNLARVL LMERDIGRPN
460
SPLTQRLIKK WEALHGLLG
Length:469
Mass (Da):52,834
Last modified:March 20, 2007 - v1
Checksum:iD693492546849C75
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC129593 mRNA. Translation: AAI29594.1.
RefSeqiNP_001091346.1. NM_001097877.1.
UniGeneiXl.48596.

Genome annotation databases

GeneIDi100037185.
KEGGixla:100037185.

Similar proteinsi

Entry informationi

Entry nameiTTC38_XENLA
AccessioniPrimary (citable) accession number: A2VD82
Entry historyiIntegrated into UniProtKB/Swiss-Prot: February 26, 2008
Last sequence update: March 20, 2007
Last modified: November 22, 2017
This is version 32 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program