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A2VD09

- A2VD09_RAT

UniProt

A2VD09 - A2VD09_RAT

Protein
Submitted name:

Abi1 protein

Gene

Abi1

Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 52 (01 Oct 2014)
      Sequence version 1 (20 Mar 2007)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. protein tyrosine kinase activator activity Source: Ensembl

    GO - Biological processi

    1. cellular component movement Source: Ensembl
    2. lamellipodium morphogenesis Source: Ensembl
    3. megakaryocyte development Source: Ensembl
    4. peptidyl-tyrosine phosphorylation Source: Ensembl
    5. somitogenesis Source: Ensembl

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Abi1 proteinImported
    Gene namesi
    Name:Abi1Imported
    OrganismiRattus norvegicus (Rat)Imported
    Taxonomic identifieri10116 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus

    Organism-specific databases

    RGDi621008. Abi1.

    Subcellular locationi

    GO - Cellular componenti

    1. cytoplasm Source: InterPro
    2. filopodium Source: Ensembl
    3. lamellipodium Source: Ensembl
    4. neuron projection Source: Ensembl

    Expressioni

    Gene expression databases

    GenevestigatoriA2VD09.

    Interactioni

    Protein-protein interaction databases

    STRINGi10116.ENSRNOP00000051435.

    Structurei

    3D structure databases

    ProteinModelPortaliA2VD09.
    SMRiA2VD09. Positions 409-476.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Contains 1 SH3 domain.UniRule annotation

    Keywords - Domaini

    SH3 domainUniRule annotation

    Phylogenomic databases

    HOGENOMiHOG000293213.
    HOVERGENiHBG050446.
    InParanoidiA2VD09.

    Family and domain databases

    InterProiIPR028457. ABI.
    IPR028456. ABI1.
    IPR012849. Abl-interactor_HHR_dom.
    IPR001452. SH3_domain.
    IPR000727. T_SNARE_dom.
    [Graphical view]
    PANTHERiPTHR10460. PTHR10460. 1 hit.
    PTHR10460:SF2. PTHR10460:SF2. 1 hit.
    PfamiPF07815. Abi_HHR. 1 hit.
    PF00018. SH3_1. 1 hit.
    [Graphical view]
    PRINTSiPR00452. SH3DOMAIN.
    SMARTiSM00326. SH3. 1 hit.
    [Graphical view]
    SUPFAMiSSF50044. SSF50044. 1 hit.
    PROSITEiPS50002. SH3. 1 hit.
    PS50192. T_SNARE. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    A2VD09-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAELQMLLEE EIPSGKRALI ESYQNLTRVA DYCENNYIQA TDKRKALEET    50
    KAYTTQSLAS VAYQINALAN NVLQLLDIQA SQLRRMESSI NHISQTVDIH 100
    KEKVARREIG ILTTNKNTSR THKIIAPANM ERPVRYIRKP IDYTVLDDVG 150
    HGVKWLKAKH GNNQPARTGT LSRTNPPTQK PPSPPVSGRG TLGRNTPYKT 200
    LEPVKPPTVP NDYMTSPARL GSQHSPGRTA SLNQRPRTHS GSSGGSGSRE 250
    NSGSSSIGIP IAVPTPSPPT AGPAAPGAAP GSQYGTMTRQ ISRHNSTTSS 300
    TSSGGYRRTP SVTAQFSAQP HVNGGPLYSQ NSISIAPPPP PMPQLTPQIP 350
    LTGFVARVQE NIADSPTPPP PPPPDDIPMF DDSPPPPPPP PVDYEDEEAA 400
    VVQYSDPYAD GDPAWAPKNY IEKVVAIYDY TKDKDDELSF KEGAIIYVIK 450
    KNDDGWFEGV CNRVTGLFPG NYVESIMHYT D 481
    Length:481
    Mass (Da):52,332
    Last modified:March 20, 2007 - v1
    Checksum:i030FE77E0D457D1D
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BC129092 mRNA. Translation: AAI29093.1.
    RefSeqiNP_077373.2. NM_024397.2.
    UniGeneiRn.43675.

    Genome annotation databases

    GeneIDi79249.
    KEGGirno:79249.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BC129092 mRNA. Translation: AAI29093.1 .
    RefSeqi NP_077373.2. NM_024397.2.
    UniGenei Rn.43675.

    3D structure databases

    ProteinModelPortali A2VD09.
    SMRi A2VD09. Positions 409-476.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 10116.ENSRNOP00000051435.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 79249.
    KEGGi rno:79249.

    Organism-specific databases

    CTDi 10006.
    RGDi 621008. Abi1.

    Phylogenomic databases

    HOGENOMi HOG000293213.
    HOVERGENi HBG050446.
    InParanoidi A2VD09.

    Miscellaneous databases

    NextBioi 614720.

    Gene expression databases

    Genevestigatori A2VD09.

    Family and domain databases

    InterProi IPR028457. ABI.
    IPR028456. ABI1.
    IPR012849. Abl-interactor_HHR_dom.
    IPR001452. SH3_domain.
    IPR000727. T_SNARE_dom.
    [Graphical view ]
    PANTHERi PTHR10460. PTHR10460. 1 hit.
    PTHR10460:SF2. PTHR10460:SF2. 1 hit.
    Pfami PF07815. Abi_HHR. 1 hit.
    PF00018. SH3_1. 1 hit.
    [Graphical view ]
    PRINTSi PR00452. SH3DOMAIN.
    SMARTi SM00326. SH3. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50044. SSF50044. 1 hit.
    PROSITEi PS50002. SH3. 1 hit.
    PS50192. T_SNARE. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
      The MGC Project Team
      Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M.
      , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
      Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Tissue: HeartImported.

    Entry informationi

    Entry nameiA2VD09_RAT
    AccessioniPrimary (citable) accession number: A2VD09
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 20, 2007
    Last sequence update: March 20, 2007
    Last modified: October 1, 2014
    This is version 52 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)