A2T7F3 (HXA7_PANTR) Reviewed, UniProtKB/Swiss-Prot
Last modified
December 14, 2011.
Version 38.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Homeobox protein Hox-A7 | ||
| Gene names |
| ||
| Organism | Pan troglodytes (Chimpanzee) | ||
| Taxonomic identifier | 9598 [NCBI] | ||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Pan |
Protein attributes
| Sequence length | 230 AA. |
| Sequence status | Complete. |
| Protein existence | Inferred from homology |
General annotation (Comments)
| Function | Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis By similarity. |
| Subcellular location | Nucleus By similarity. |
| Sequence similarities | Belongs to the Antp homeobox family. Contains 1 homeobox DNA-binding domain. |
Ontologies
| Keywords | |
|---|---|
| Biological process | Transcription Transcription regulation |
| Cellular component | Nucleus |
| Domain | Homeobox |
| Ligand | DNA-binding |
| Molecular function | Developmental protein |
| Gene Ontology (GO) | |
| Biological process | multicellular organismal development Inferred from electronic annotation. Source: UniProtKB-KW transcription, DNA-dependentInferred from electronic annotation. Source: UniProtKB-KW |
| Cellular component | nucleus Inferred from electronic annotation. Source: UniProtKB-SubCell |
| Molecular function | sequence-specific DNA binding Inferred from electronic annotation. Source: InterPro sequence-specific DNA binding transcription factor activityInferred from electronic annotation. Source: InterPro |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 230 | 230 | Homeobox protein Hox-A7 | PRO_0000285421 | |||||
Regions | |||||||||
| DNA binding | 130 – 189 | 60 | Homeobox | ||||||
| Motif | 119 – 124 | 6 | Antp-type hexapeptide | ||||||
| Compositional bias | 157 – 160 | 4 | Poly-Arg | ||||||
| Compositional bias | 196 – 199 | 4 | Poly-Ala | ||||||
| Compositional bias | 214 – 230 | 17 | Asp/Glu-rich (highly acidic) | ||||||
| Compositional bias | 223 – 230 | 8 | Poly-Glu | ||||||
Sequences
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References
| [1] | "Positive selection in transcription factor genes on the human lineage." Nickel G.C., Tefft D.L., Trevarthen K., Funt J., Adams M.D. Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | DQ977437 Genomic DNA. Translation: ABM92108.1. |
| RefSeq | NP_001129067.1. NM_001135595.1. |
| UniGene | Ptr.6319. |
3D structure databases | |
| ProteinModelPortal | A2T7F3. |
| SMR | A2T7F3. Positions 130-193. |
| ModBase | Search... |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| GeneID | 745634. |
| KEGG | ptr:745634. |
Organism-specific databases | |
| CTD | 3204. |
Phylogenomic databases | |
| eggNOG | prNOG04663. |
| GeneTree | ENSGT00600000084133. |
| HOVERGEN | HBG016849. |
| InParanoid | A2T7F3. |
| OrthoDB | EOG4C87V5. |
Family and domain databases | |
| InterPro | IPR001356. Homeobox. IPR017995. Homeobox_antennapedia. IPR001827. Homeobox_Antennapedia_CS. IPR017970. Homeobox_CS. IPR020479. Homeobox_eu. IPR009057. Homeodomain-like. IPR012287. Homeodomain-rel. [Graphical view] |
| Gene3D | G3DSA:1.10.10.60. Homeodomain-rel. 1 hit. |
| KO | K09307. |
| Pfam | PF00046. Homeobox. 1 hit. [Graphical view] |
| PRINTS | PR00025. ANTENNAPEDIA. PR00024. HOMEOBOX. |
| SMART | SM00389. HOX. 1 hit. [Graphical view] |
| SUPFAM | SSF46689. Homeodomain_like. 1 hit. |
| PROSITE | PS00032. ANTENNAPEDIA. 1 hit. PS00027. HOMEOBOX_1. 1 hit. PS50071. HOMEOBOX_2. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | HXA7_PANTR | ||||||||
| Accession | Primary (citable) accession number: A2T7F3 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
Relevant documents
| Vertebrate homeotic Hox proteins Nomenclature of vertebrate homeotic Hox proteins and list of entries |
| SIMILARITY comments Index of protein domains and families |

Clusters with