A2SKR5 (AROE_METPP) Reviewed, UniProtKB/Swiss-Prot
Last modified
December 14, 2011.
Version 48.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Shikimate dehydrogenase EC=1.1.1.25 | ||||
| Gene names |
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| Organism | Methylibium petroleiphilum (strain PM1) [Complete proteome] [HAMAP] | ||||
| Taxonomic identifier | 420662 [NCBI] | ||||
| Taxonomic lineage | Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Methylibium |
Protein attributes
| Sequence length | 294 AA. |
| Sequence status | Complete. |
| Protein existence | Inferred from homology |
General annotation (Comments)
| Catalytic activity | Shikimate + NADP+ = 3-dehydroshikimate + NADPH. HAMAP MF_00222 |
| Pathway | Metabolic intermediate biosynthesis; chorismate biosynthesis; chorismate from D-erythrose 4-phosphate and phosphoenolpyruvate: step 4/7. HAMAP MF_00222 |
| Sequence similarities | Belongs to the shikimate dehydrogenase family. |
Ontologies
| Keywords | |
|---|---|
| Biological process | Amino-acid biosynthesis Aromatic amino acid biosynthesis |
| Ligand | NADP |
| Molecular function | Oxidoreductase |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological process | aromatic amino acid family biosynthetic process Inferred from electronic annotation. Source: UniProtKB-KW |
| Molecular function | NADP binding Inferred from electronic annotation. Source: InterPro shikimate 3-dehydrogenase (NADP+) activityInferred from electronic annotation. Source: EC |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 294 | 294 | Shikimate dehydrogenase HAMAP MF_00222 | PRO_0000325134 | |||||
Regions | |||||||||
| Nucleotide binding | 141 – 145 | 5 | NADP By similarity | ||||||
Sites | |||||||||
| Active site | 80 | 1 | Proton acceptor Potential | ||||||
Sequences
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References
| [1] | "Whole-genome analysis of the methyl tert-butyl ether-degrading beta-proteobacterium Methylibium petroleiphilum PM1." Kane S.R., Chakicherla A.Y., Chain P.S.G., Schmidt R., Shin M.W., Legler T.C., Scow K.M., Larimer F.W., Lucas S.M., Richardson P.M., Hristova K.R. J. Bacteriol. 189:1931-1945(2007) [PubMed: 17158667] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: PM1. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | CP000555 Genomic DNA. Translation: ABM96154.1. |
| RefSeq | YP_001022389.1. NC_008825.1. |
3D structure databases | |
| ProteinModelPortal | A2SKR5. |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | A2SKR5. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| GeneID | 4786540. |
| GenomeReviews | Gene locus Mpe_A3201 in contig CP000555_GR. |
| KEGG | mpt:Mpe_A3201. |
| NMPDR | fig|279263.3.peg.3822. |
Organism-specific databases | |
| CMR | Search... |
Phylogenomic databases | |
| eggNOG | COG0169. |
| HOGENOM | HBG553408. |
| OMA | FWRGVRP. |
| PhylomeDB | A2SKR5. |
| ProtClustDB | PRK00258. |
Enzyme and pathway databases | |
| BioCyc | MPET420662:MPE_A3201-MONOMER. |
Family and domain databases | |
| HAMAP | MF_00222. Shikimate_DH_AroE. [Tree] |
| InterPro | IPR016040. NAD(P)-bd_dom. IPR011342. Shikimate_DH. IPR013708. Shikimate_DH-bd_N. IPR022893. Shikimate_quinate_DH. IPR006151. Shikm_DH/Glu-tRNA_Rdtase. [Graphical view] |
| Gene3D | G3DSA:3.40.50.720. NAD(P)-bd. 1 hit. |
| KO | K00014. |
| Pfam | PF01488. Shikimate_DH. 1 hit. PF08501. Shikimate_dh_N. 1 hit. [Graphical view] |
| TIGRFAMs | TIGR00507. AroE. 1 hit. |
| ProtoNet | Search... |
Entry information
| Entry name | AROE_METPP | ||||||||
| Accession | Primary (citable) accession number: A2SKR5 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Prokaryotic Protein Annotation Program | ||||||||
Relevant documents
| PATHWAY comments Index of metabolic and biosynthesis pathways |
| SIMILARITY comments Index of protein domains and families |

Clusters with