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A2SFZ1 (A2SFZ1_METPP) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 53. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length542 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
A2SFZ1 [UniParc].

Last modified March 6, 2007. Version 1.
Checksum: D7F88AB218D506A3

FASTA54259,485
        10         20         30         40         50         60 
MRDFARLYAA LDATTSTHEK LEALTAYFRA APARHAAWAA YFLAGGKPRQ AVPTALLRQL 

        70         80         90        100        110        120 
AAERAGLPPW LFDACYEAVG DLAETIALVL PPPVRDSALG LDDWMRERIG PLRGAPPEQV 

       130        140        150        160        170        180 
RTALFDAWDE LDTPGRFLLG KLIGGGFRVG VSRLLLTRAL AAVAGLDAKL IAQRLMGWTD 

       190        200        210        220        230        240 
KGAQPTADAY AALLAPEAAT GDASPGGQPY PFFLAHPLQA EPQTLGALAD WQAEWKYDGI 

       250        260        270        280        290        300 
RAQLVRRGGQ SWLWSRGEEL ITDRFPELAK LSLPDGAVID GEIVVWQDSR PAPFAALQRR 

       310        320        330        340        350        360 
IGRKTLGARL LQELPAVLIA YDLLEQEGVD RRDEPQHLRR MRLEQLISAT ADPALQLSPQ 

       370        380        390        400        410        420 
VQAPDWAALA VLRDTARERG VEGLMLKARE ARYGVGRTKD VGVWWKWKVD PYAVDAVLVY 

       430        440        450        460        470        480 
AQAGHGRRAS LYTDYTFAVW DAPPDGAPGE RRLVPFAKAY SGLSDAEIAR VDAVIRKTTI 

       490        500        510        520        530        540 
EKFGPVRSVR PTLVFEIGFE GIALSTRHRA GVAVRFPRIL RTRPDKPVEE ADTLATLKGL 


LT 

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References

[1]"Whole-genome analysis of the methyl tert-butyl ether-degrading beta-proteobacterium Methylibium petroleiphilum PM1."
Kane S.R., Chakicherla A.Y., Chain P.S., Schmidt R., Shin M.W., Legler T.C., Scow K.M., Larimer F.W., Lucas S.M., Richardson P.M., Hristova K.R.
J. Bacteriol. 189:1931-1945(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: PM1 EMBL ABM94480.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000555 Genomic DNA. Translation: ABM94480.1.
RefSeqYP_001020715.1. NC_008825.1.

3D structure databases

ProteinModelPortalA2SFZ1.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING420662.Mpe_A1518.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABM94480; ABM94480; Mpe_A1518.
GeneID4783536.
KEGGmpt:Mpe_A1518.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1793.
HOGENOMHOG000036007.
KOK01971.
OMAGQPYPFF.
OrthoDBEOG6Q8HXT.
ProtClustDBPRK09247.

Enzyme and pathway databases

BioCycMPET420662:GHBE-1540-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR04120. DNA_lig_bact. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA2SFZ1_METPP
AccessionPrimary (citable) accession number: A2SFZ1
Entry history
Integrated into UniProtKB/TrEMBL: March 6, 2007
Last sequence update: March 6, 2007
Last modified: April 16, 2014
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)