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A2SFZ1

- A2SFZ1_METPP

UniProt

A2SFZ1 - A2SFZ1_METPP

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Protein
Submitted name:

DNA ligase, ATP-dependent, putative

Gene

Mpe_A1518

Organism
Methylibium petroleiphilum (strain PM1)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciMPET420662:GHBE-1540-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA ligase, ATP-dependent, putativeImported (EC:6.5.1.1Imported)
Gene namesi
Ordered Locus Names:Mpe_A1518Imported
OrganismiMethylibium petroleiphilum (strain PM1)Imported
Taxonomic identifieri420662 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesMethylibium
ProteomesiUP000000366: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi420662.Mpe_A1518.

Structurei

3D structure databases

ProteinModelPortaliA2SFZ1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000036007.
KOiK01971.
OMAiNRHKSGV.
OrthoDBiEOG6Q8HXT.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A2SFZ1-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MRDFARLYAA LDATTSTHEK LEALTAYFRA APARHAAWAA YFLAGGKPRQ
60 70 80 90 100
AVPTALLRQL AAERAGLPPW LFDACYEAVG DLAETIALVL PPPVRDSALG
110 120 130 140 150
LDDWMRERIG PLRGAPPEQV RTALFDAWDE LDTPGRFLLG KLIGGGFRVG
160 170 180 190 200
VSRLLLTRAL AAVAGLDAKL IAQRLMGWTD KGAQPTADAY AALLAPEAAT
210 220 230 240 250
GDASPGGQPY PFFLAHPLQA EPQTLGALAD WQAEWKYDGI RAQLVRRGGQ
260 270 280 290 300
SWLWSRGEEL ITDRFPELAK LSLPDGAVID GEIVVWQDSR PAPFAALQRR
310 320 330 340 350
IGRKTLGARL LQELPAVLIA YDLLEQEGVD RRDEPQHLRR MRLEQLISAT
360 370 380 390 400
ADPALQLSPQ VQAPDWAALA VLRDTARERG VEGLMLKARE ARYGVGRTKD
410 420 430 440 450
VGVWWKWKVD PYAVDAVLVY AQAGHGRRAS LYTDYTFAVW DAPPDGAPGE
460 470 480 490 500
RRLVPFAKAY SGLSDAEIAR VDAVIRKTTI EKFGPVRSVR PTLVFEIGFE
510 520 530 540
GIALSTRHRA GVAVRFPRIL RTRPDKPVEE ADTLATLKGL LT
Length:542
Mass (Da):59,485
Last modified:March 6, 2007 - v1
Checksum:iD7F88AB218D506A3
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000555 Genomic DNA. Translation: ABM94480.1.
RefSeqiYP_001020715.1. NC_008825.1.

Genome annotation databases

EnsemblBacteriaiABM94480; ABM94480; Mpe_A1518.
GeneIDi4783536.
KEGGimpt:Mpe_A1518.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000555 Genomic DNA. Translation: ABM94480.1 .
RefSeqi YP_001020715.1. NC_008825.1.

3D structure databases

ProteinModelPortali A2SFZ1.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 420662.Mpe_A1518.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABM94480 ; ABM94480 ; Mpe_A1518 .
GeneIDi 4783536.
KEGGi mpt:Mpe_A1518.

Phylogenomic databases

eggNOGi COG1793.
HOGENOMi HOG000036007.
KOi K01971.
OMAi NRHKSGV.
OrthoDBi EOG6Q8HXT.

Enzyme and pathway databases

BioCyci MPET420662:GHBE-1540-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Whole-genome analysis of the methyl tert-butyl ether-degrading beta-proteobacterium Methylibium petroleiphilum PM1."
    Kane S.R., Chakicherla A.Y., Chain P.S.G., Schmidt R., Shin M.W., Legler T.C., Scow K.M., Larimer F.W., Lucas S.M., Richardson P.M., Hristova K.R.
    J. Bacteriol. 189:1931-1945(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: PM1Imported.

Entry informationi

Entry nameiA2SFZ1_METPP
AccessioniPrimary (citable) accession number: A2SFZ1
Entry historyi
Integrated into UniProtKB/TrEMBL: March 6, 2007
Last sequence update: March 6, 2007
Last modified: October 29, 2014
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3