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A2SFZ1

- A2SFZ1_METPP

UniProt

A2SFZ1 - A2SFZ1_METPP

Protein
Submitted name:

DNA ligase, ATP-dependent, putative

Gene

Mpe_A1518

Organism
Methylibium petroleiphilum (strain PM1)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 56 (01 Oct 2014)
      Sequence version 1 (06 Mar 2007)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA binding Source: InterPro
    3. DNA ligase (ATP) activity Source: UniProtKB-EC

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciMPET420662:GHBE-1540-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    DNA ligase, ATP-dependent, putativeImported (EC:6.5.1.1Imported)
    Gene namesi
    Ordered Locus Names:Mpe_A1518Imported
    OrganismiMethylibium petroleiphilum (strain PM1)Imported
    Taxonomic identifieri420662 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesMethylibium
    ProteomesiUP000000366: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi420662.Mpe_A1518.

    Structurei

    3D structure databases

    ProteinModelPortaliA2SFZ1.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1793.
    HOGENOMiHOG000036007.
    KOiK01971.
    OMAiNRHKSGV.
    OrthoDBiEOG6Q8HXT.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    A2SFZ1-1 [UniParc]FASTAAdd to Basket

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    MRDFARLYAA LDATTSTHEK LEALTAYFRA APARHAAWAA YFLAGGKPRQ    50
    AVPTALLRQL AAERAGLPPW LFDACYEAVG DLAETIALVL PPPVRDSALG 100
    LDDWMRERIG PLRGAPPEQV RTALFDAWDE LDTPGRFLLG KLIGGGFRVG 150
    VSRLLLTRAL AAVAGLDAKL IAQRLMGWTD KGAQPTADAY AALLAPEAAT 200
    GDASPGGQPY PFFLAHPLQA EPQTLGALAD WQAEWKYDGI RAQLVRRGGQ 250
    SWLWSRGEEL ITDRFPELAK LSLPDGAVID GEIVVWQDSR PAPFAALQRR 300
    IGRKTLGARL LQELPAVLIA YDLLEQEGVD RRDEPQHLRR MRLEQLISAT 350
    ADPALQLSPQ VQAPDWAALA VLRDTARERG VEGLMLKARE ARYGVGRTKD 400
    VGVWWKWKVD PYAVDAVLVY AQAGHGRRAS LYTDYTFAVW DAPPDGAPGE 450
    RRLVPFAKAY SGLSDAEIAR VDAVIRKTTI EKFGPVRSVR PTLVFEIGFE 500
    GIALSTRHRA GVAVRFPRIL RTRPDKPVEE ADTLATLKGL LT 542
    Length:542
    Mass (Da):59,485
    Last modified:March 6, 2007 - v1
    Checksum:iD7F88AB218D506A3
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000555 Genomic DNA. Translation: ABM94480.1.
    RefSeqiWP_011829117.1. NC_008825.1.
    YP_001020715.1. NC_008825.1.

    Genome annotation databases

    EnsemblBacteriaiABM94480; ABM94480; Mpe_A1518.
    GeneIDi4783536.
    KEGGimpt:Mpe_A1518.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000555 Genomic DNA. Translation: ABM94480.1 .
    RefSeqi WP_011829117.1. NC_008825.1.
    YP_001020715.1. NC_008825.1.

    3D structure databases

    ProteinModelPortali A2SFZ1.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 420662.Mpe_A1518.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABM94480 ; ABM94480 ; Mpe_A1518 .
    GeneIDi 4783536.
    KEGGi mpt:Mpe_A1518.

    Phylogenomic databases

    eggNOGi COG1793.
    HOGENOMi HOG000036007.
    KOi K01971.
    OMAi NRHKSGV.
    OrthoDBi EOG6Q8HXT.

    Enzyme and pathway databases

    BioCyci MPET420662:GHBE-1540-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Whole-genome analysis of the methyl tert-butyl ether-degrading beta-proteobacterium Methylibium petroleiphilum PM1."
      Kane S.R., Chakicherla A.Y., Chain P.S.G., Schmidt R., Shin M.W., Legler T.C., Scow K.M., Larimer F.W., Lucas S.M., Richardson P.M., Hristova K.R.
      J. Bacteriol. 189:1931-1945(2007) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: PM1Imported.

    Entry informationi

    Entry nameiA2SFZ1_METPP
    AccessioniPrimary (citable) accession number: A2SFZ1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 6, 2007
    Last sequence update: March 6, 2007
    Last modified: October 1, 2014
    This is version 56 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3