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Protein

Uncharacterized protein C17orf102

Gene

C17orf102

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein C17orf102
Gene namesi
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640: Chromosome 17

Organism-specific databases

HGNCiHGNC:34412. C17orf102.

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA164716932.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 167167Uncharacterized protein C17orf102PRO_0000348468Add
BLAST

Proteomic databases

PaxDbiA2RUQ5.
PRIDEiA2RUQ5.

PTM databases

PhosphoSiteiA2RUQ5.

Expressioni

Gene expression databases

BgeeiA2RUQ5.
GenevestigatoriA2RUQ5.

Organism-specific databases

HPAiHPA043259.

Interactioni

Protein-protein interaction databases

BioGridi134651. 4 interactions.

Structurei

3D structure databases

ProteinModelPortaliA2RUQ5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiNOG73773.
GeneTreeiENSGT00390000003008.
HOGENOMiHOG000111947.
InParanoidiA2RUQ5.
OMAiAGNQPRC.
OrthoDBiEOG75TMDF.
PhylomeDBiA2RUQ5.
TreeFamiTF353629.

Sequencei

Sequence statusi: Complete.

A2RUQ5-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MFDFSFPTPA SAGTRMGPAS CGGRSLHLPQ LRFSRVDATA VTDVPFQRMH
60 70 80 90 100
APHRAPEVFC SRSSRGAGRG HPTPTPRVRW ALAGNQPRCC AQLLSGRGGS
110 120 130 140 150
GAQLRAGWVR GAAVGNLFIL LLGKEDGEEE GTVLSYSSMV HISNITGIVG
160
TTVSRTKPAL VLMELTF
Length:167
Mass (Da):17,761
Last modified:March 6, 2007 - v1
Checksum:i361507D8781DE492
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti112 – 1121A → P in BAC86680. (PubMed:14702039)Curated

Natural variant

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Natural varianti98 – 981G → R.1 Publication
Corresponds to variant rs58529418 [ dbSNP | Ensembl ].
VAR_046187
Natural varianti155 – 1551R → K.2 Publications
Corresponds to variant rs887230 [ dbSNP | Ensembl ].
VAR_046188

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK126768 mRNA. Translation: BAC86680.1.
BC133004 mRNA. Translation: AAI33005.1.
BC136710 mRNA. Translation: AAI36711.1.
BC142651 mRNA. Translation: AAI42652.1.
CCDSiCCDS42297.1.
RefSeqiNP_997337.2. NM_207454.2.
UniGeneiHs.514090.

Genome annotation databases

EnsembliENST00000357754; ENSP00000350392; ENSG00000197322.
GeneIDi400591.
KEGGihsa:400591.
UCSCiuc002hie.1. human.

Keywords - Coding sequence diversityi

Polymorphism

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK126768 mRNA. Translation: BAC86680.1.
BC133004 mRNA. Translation: AAI33005.1.
BC136710 mRNA. Translation: AAI36711.1.
BC142651 mRNA. Translation: AAI42652.1.
CCDSiCCDS42297.1.
RefSeqiNP_997337.2. NM_207454.2.
UniGeneiHs.514090.

3D structure databases

ProteinModelPortaliA2RUQ5.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi134651. 4 interactions.

PTM databases

PhosphoSiteiA2RUQ5.

Proteomic databases

PaxDbiA2RUQ5.
PRIDEiA2RUQ5.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000357754; ENSP00000350392; ENSG00000197322.
GeneIDi400591.
KEGGihsa:400591.
UCSCiuc002hie.1. human.

Organism-specific databases

CTDi400591.
GeneCardsiGC17M032901.
HGNCiHGNC:34412. C17orf102.
HPAiHPA043259.
neXtProtiNX_A2RUQ5.
PharmGKBiPA164716932.
GenAtlasiSearch...

Phylogenomic databases

eggNOGiNOG73773.
GeneTreeiENSGT00390000003008.
HOGENOMiHOG000111947.
InParanoidiA2RUQ5.
OMAiAGNQPRC.
OrthoDBiEOG75TMDF.
PhylomeDBiA2RUQ5.
TreeFamiTF353629.

Miscellaneous databases

GenomeRNAii400591.
NextBioi106015.

Gene expression databases

BgeeiA2RUQ5.
GenevestigatoriA2RUQ5.

Family and domain databases

ProtoNetiSearch...

Publicationsi

  1. "Complete sequencing and characterization of 21,243 full-length human cDNAs."
    Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S.
    , Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K., Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H., Tanase T.-O., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S., Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O., Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H., Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B., Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S.
    Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA], VARIANTS ARG-98 AND LYS-155.
    Tissue: Cerebellum.
  2. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA], VARIANT LYS-155.
    Tissue: Brain.

Entry informationi

Entry nameiCQ102_HUMAN
AccessioniPrimary (citable) accession number: A2RUQ5
Secondary accession number(s): A5PKX0, Q6ZTB3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: September 2, 2008
Last sequence update: March 6, 2007
Last modified: January 7, 2015
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 17
    Human chromosome 17: entries, gene names and cross-references to MIM
  2. Human entries with polymorphisms or disease mutations
    List of human entries with polymorphisms or disease mutations
  3. Human polymorphisms and disease mutations
    Index of human polymorphisms and disease mutations

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.