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Protein

Coronin

Gene

Coro1b

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at protein leveli

Functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Recommended name:
CoroninUniRule annotation
Gene namesi
Name:Coro1bImported
ORF Names:mCG_3873Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:1345963. Coro1b.

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Proteomic databases

PeptideAtlasiA2RS22.

Expressioni

Gene expression databases

BgeeiENSMUSG00000024835.
ExpressionAtlasiA2RS22. baseline and differential.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000008893.

Structurei

3D structure databases

ProteinModelPortaliA2RS22.
SMRiA2RS22.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini78 – 213WD_REPEATS_REGIONInterPro annotationAdd BLAST136
Repeati78 – 112WDPROSITE-ProRule annotationAdd BLAST35
Repeati128 – 170WDPROSITE-ProRule annotationAdd BLAST43

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili448 – 482Sequence analysisAdd BLAST35

Sequence similaritiesi

Belongs to the WD repeat coronin family.UniRule annotation

Keywords - Domaini

Coiled coilSequence analysis, RepeatUniRule annotation, WD repeatPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG0303. Eukaryota.
ENOG410XQAD. LUCA.
HOVERGENiHBG059978.
KOiK13886.
OMAiNSCEITR.
OrthoDBiEOG091G03H5.

Family and domain databases

Gene3Di2.130.10.10. 3 hits.
InterProiView protein in InterPro
IPR015505. Coronin.
IPR015048. DUF1899.
IPR015943. WD40/YVTN_repeat-like_dom.
IPR001680. WD40_repeat.
IPR019775. WD40_repeat_CS.
IPR017986. WD40_repeat_dom.
PANTHERiPTHR10856. PTHR10856. 1 hit.
PfamiView protein in Pfam
PF08953. DUF1899. 1 hit.
PF00400. WD40. 3 hits.
SMARTiView protein in SMART
SM01166. DUF1899. 1 hit.
SM00320. WD40. 3 hits.
SUPFAMiSSF50978. SSF50978. 1 hit.
PROSITEiView protein in PROSITE
PS00678. WD_REPEATS_1. 1 hit.
PS50082. WD_REPEATS_2. 2 hits.
PS50294. WD_REPEATS_REGION. 1 hit.

Sequencei

Sequence statusi: Complete.

A2RS22-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSFRKVVRQS KFRHVFGQPV KNDQCYEDIR VSRVTWDSTF CAVNPKFLAV
60 70 80 90 100
IVEASGGGAF MVLPLNKTGR IDKAYPTVCG HTGPVLDIDW CPHNDEVIAS
110 120 130 140 150
GSEDCTVMVW QIPENGLTSP LTEPVVVLEG HTKRVGIITW HPTARNVLLS
160 170 180 190 200
AGCDNVVLIW NVGTAEELYR LDSLHPDLIY NVSWNHNGSL FCSACKDKSV
210 220 230 240 250
RIIDPRRGTL VAEREKAHEG ARPMRAIFLA DGKVFTTGFS RMSERQLALW
260 270 280 290 300
DPENLEEPMA LQELDSSNGA LLPFYDPDTS VVYVCGKGDS SIRYFEITDE
310 320 330 340 350
PPYIHFLNTF TSKEPQRGMG SMPKRGLEVS KCEIARFYKL HERKCEPIVM
360 370 380 390 400
TVPRKSDLFQ DDLYPDTAGP EAALEAEDWV SGQDANPILI SLREAYVPSK
410 420 430 440 450
QRDLKVSRRN VLSDSRPASY SRSGASTATA VTDVPSGNLA GAGEAGKLEE
460 470 480
VMQELRALRM LVKEQGERIS RLEEQLGRME NGDT
Length:484
Mass (Da):53,912
Last modified:March 6, 2007 - v1
Checksum:i9631CC02E7EAC72F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC131944 mRNA. Translation: AAI31945.1.
BC132617 mRNA. Translation: AAI32618.1.
CH466612 Genomic DNA. Translation: EDL33020.1.
CH466612 Genomic DNA. Translation: EDL33021.1.
RefSeqiNP_035908.1. NM_011778.2.
XP_006531804.1. XM_006531741.2.
XP_006531805.1. XM_006531742.1.
UniGeneiMm.276859.

Genome annotation databases

GeneIDi23789.
KEGGimmu:23789.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC131944 mRNA. Translation: AAI31945.1.
BC132617 mRNA. Translation: AAI32618.1.
CH466612 Genomic DNA. Translation: EDL33020.1.
CH466612 Genomic DNA. Translation: EDL33021.1.
RefSeqiNP_035908.1. NM_011778.2.
XP_006531804.1. XM_006531741.2.
XP_006531805.1. XM_006531742.1.
UniGeneiMm.276859.

3D structure databases

ProteinModelPortaliA2RS22.
SMRiA2RS22.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000008893.

Proteomic databases

PeptideAtlasiA2RS22.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi23789.
KEGGimmu:23789.

Organism-specific databases

CTDi57175.
MGIiMGI:1345963. Coro1b.

Phylogenomic databases

eggNOGiKOG0303. Eukaryota.
ENOG410XQAD. LUCA.
HOVERGENiHBG059978.
KOiK13886.
OMAiNSCEITR.
OrthoDBiEOG091G03H5.

Miscellaneous databases

ChiTaRSiCoro1b. mouse.
SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000024835.
ExpressionAtlasiA2RS22. baseline and differential.

Family and domain databases

Gene3Di2.130.10.10. 3 hits.
InterProiView protein in InterPro
IPR015505. Coronin.
IPR015048. DUF1899.
IPR015943. WD40/YVTN_repeat-like_dom.
IPR001680. WD40_repeat.
IPR019775. WD40_repeat_CS.
IPR017986. WD40_repeat_dom.
PANTHERiPTHR10856. PTHR10856. 1 hit.
PfamiView protein in Pfam
PF08953. DUF1899. 1 hit.
PF00400. WD40. 3 hits.
SMARTiView protein in SMART
SM01166. DUF1899. 1 hit.
SM00320. WD40. 3 hits.
SUPFAMiSSF50978. SSF50978. 1 hit.
PROSITEiView protein in PROSITE
PS00678. WD_REPEATS_1. 1 hit.
PS50082. WD_REPEATS_2. 2 hits.
PS50294. WD_REPEATS_REGION. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiA2RS22_MOUSE
AccessioniPrimary (citable) accession number: A2RS22
Entry historyiIntegrated into UniProtKB/TrEMBL: March 6, 2007
Last sequence update: March 6, 2007
Last modified: April 12, 2017
This is version 97 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.