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Protein
Submitted name:

SNRNP200 protein

Gene

SNRNP200

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Submitted name:
SNRNP200 proteinImported
Gene namesi
Name:SNRNP200Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

PTM / Processingi

Proteomic databases

MaxQBiA2RRQ7.
PaxDbiA2RRQ7.
PeptideAtlasiA2RRQ7.
PRIDEiA2RRQ7.

Expressioni

Gene expression databases

BgeeiENSG00000144028.

Interactioni

Protein-protein interaction databases

STRINGi9606.ENSP00000317123.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini4 – 212Helicase C-terminalInterPro annotationAdd BLAST209

Phylogenomic databases

eggNOGiKOG0952. Eukaryota.
COG1204. LUCA.
HOVERGENiHBG078981.

Family and domain databases

Gene3Di2.60.40.150. 1 hit.
3.40.50.300. 1 hit.
InterProiIPR000008. C2_dom.
IPR001650. Helicase_C.
IPR014756. Ig_E-set.
IPR027417. P-loop_NTPase.
IPR004179. Sec63-dom.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF02889. Sec63. 1 hit.
[Graphical view]
SMARTiSM00490. HELICc. 1 hit.
SM00973. Sec63. 1 hit.
[Graphical view]
SUPFAMiSSF46785. SSF46785. 1 hit.
SSF52540. SSF52540. 1 hit.
SSF81296. SSF81296. 1 hit.
PROSITEiPS51194. HELICASE_CTER. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A2RRQ7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAKPVYHAIT KHSPKKPVIV FVPSRKQTRL TAIDILTTCA ADIQRQRFLH
60 70 80 90 100
CTEKDLIPYL EKLSDSTLKE TLLNGVGYLH EGLSPMERRL VEQLFSSGAI
110 120 130 140 150
QVVVASRSLC WGMNVAAHLV IIMDTQYYNG KIHAYVDYPI YDVLQMVGHA
160 170 180 190 200
NRPLQDDEGR CVIMCQGSKK DFFKKFLYEP LPVESHLDHC MHDHFNAEIV
210 220 230 240 250
TKTIENKQDA VDYLTWTFLY RRMTQNPNYY NLQGISHRHL SDHLSELVEQ
260 270 280 290 300
TLSDLEQSKC ISIEDEMDVA PLNLGMIAAY YYINYTTIEL FSMSLNAKTK
310 320 330 340 350
VRGLIEIISN AAEYENIPIR HHEDNLLRQL AQKVPHKLNN PKFNDPHVKT
360 370 380 390 400
NLLLQAHLSR MQLSAELQSD TEEILSKAIR LIQACVDVLS SNGWLSPALA
410 420 430 440 450
AMELAQMVTQ AMWSKDSYLK QLPHFTSEHI KRCTDKGVES VFDIMEMEDE
460 470 480 490 500
ERNALLQLTD SQIADVARFC NRYPNIELSY EVVDKDSIRS GGPVVVLVQL
510 520 530 540 550
EREEEVTGPV IAPLFPQKRE EGWWVVIGDA KSNSLISIKR LTLQQKAKVK
560 570 580 590
LDFVAPATGA HNYTLYFMSD AYMGCDQEYK FSVDVKEAET DSDSD
Length:595
Mass (Da):67,913
Last modified:March 6, 2007 - v1
Checksum:iDBD02E6FB996458E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC131784 mRNA. Translation: AAI31785.1.
UniGeneiHs.246112.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC131784 mRNA. Translation: AAI31785.1.
UniGeneiHs.246112.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9606.ENSP00000317123.

Proteomic databases

MaxQBiA2RRQ7.
PaxDbiA2RRQ7.
PeptideAtlasiA2RRQ7.
PRIDEiA2RRQ7.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Phylogenomic databases

eggNOGiKOG0952. Eukaryota.
COG1204. LUCA.
HOVERGENiHBG078981.

Miscellaneous databases

ChiTaRSiSNRNP200. human.

Gene expression databases

BgeeiENSG00000144028.

Family and domain databases

Gene3Di2.60.40.150. 1 hit.
3.40.50.300. 1 hit.
InterProiIPR000008. C2_dom.
IPR001650. Helicase_C.
IPR014756. Ig_E-set.
IPR027417. P-loop_NTPase.
IPR004179. Sec63-dom.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF02889. Sec63. 1 hit.
[Graphical view]
SMARTiSM00490. HELICc. 1 hit.
SM00973. Sec63. 1 hit.
[Graphical view]
SUPFAMiSSF46785. SSF46785. 1 hit.
SSF52540. SSF52540. 1 hit.
SSF81296. SSF81296. 1 hit.
PROSITEiPS51194. HELICASE_CTER. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiA2RRQ7_HUMAN
AccessioniPrimary (citable) accession number: A2RRQ7
Entry historyi
Integrated into UniProtKB/TrEMBL: March 6, 2007
Last sequence update: March 6, 2007
Last modified: October 5, 2016
This is version 63 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.