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Protein

Ribosomal RNA small subunit methyltransferase B

Gene

sunL

Organism
Lactococcus lactis subsp. cremoris (strain MG1363)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

MethyltransferaseSAAS annotationImported, Transferase

Keywords - Biological processi

rRNA processingSAAS annotation

Keywords - Ligandi

RNA-bindingSAAS annotation, S-adenosyl-L-methionineSAAS annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Ribosomal RNA small subunit methyltransferase BSAAS annotation (EC:2.1.1.-SAAS annotation)
Gene namesi
Name:sunLImported
Ordered Locus Names:llmg_2081Imported
OrganismiLactococcus lactis subsp. cremoris (strain MG1363)Imported
Taxonomic identifieri416870 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesStreptococcaceaeLactococcus
Proteomesi
  • UP000000364 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm SAAS annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

CytoplasmSAAS annotation

Interactioni

Protein-protein interaction databases

STRINGi416870.llmg_2081.

Structurei

3D structure databases

ProteinModelPortaliA2RMW2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini139 – 422SAM_MT_RSMB_NOPInterPro annotationAdd BLAST284

Sequence similaritiesi

Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.SAAS annotation

Phylogenomic databases

eggNOGiENOG4105CYJ. Bacteria.
COG0144. LUCA.
HOGENOMiHOG000037300.
KOiK03500.
OMAiHIGLYQL.

Family and domain databases

Gene3Di1.10.940.10. 1 hit.
3.40.50.150. 1 hit.
InterProiIPR018314. Fmu/NOL1/Nop2p_CS.
IPR001678. MeTrfase_RsmB/NOP2.
IPR006027. NusB_RsmB_TIM44.
IPR023267. RCMT.
IPR004573. rRNA_ssu_MeTfrase_B.
IPR029063. SAM-dependent_MTases.
[Graphical view]
PfamiPF01189. Methyltr_RsmB-F. 1 hit.
PF01029. NusB. 1 hit.
[Graphical view]
PRINTSiPR02008. RCMTFAMILY.
SUPFAMiSSF48013. SSF48013. 1 hit.
SSF53335. SSF53335. 1 hit.
TIGRFAMsiTIGR00563. rsmB. 1 hit.
PROSITEiPS01153. NOL1_NOP2_SUN. 1 hit.
PS51686. SAM_MT_RSMB_NOP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A2RMW2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTKNARQTAL DVLNDIFGND AYANISLDRN LRDSELSTVD KGFVTALVYG
60 70 80 90 100
VVSKKALLEW YITPLLKKEP KPWAKMLLLL TIYQVLFMDK VPISAAVDEA
110 120 130 140 150
VKIAKRHDGQ ATANFINAVL RNFMRSEHRN EEPKDWETKY SMPKLLLDKM
160 170 180 190 200
VRQFGGKRTG EILESLEKPS HVSLRKIDPT VEIAGTRPSL LTETALIADS
210 220 230 240 250
GNFSITEEFQ TGRITIQDET SQLVAPQLEL EGTEEVLDAC AAPGGKSTHM
260 270 280 290 300
AQYLTTGHIT ALDLYEHKLD LINQNAQRQH VADKITTQKA DATMIYENFG
310 320 330 340 350
PEKFDRILVD APCSGIGLIR RKPDIRYRKE SSDFIDLQKI QLEILNSASK
360 370 380 390 400
SLKKSGIMVY STCTIFDEEN FDVVHEFLEN HPNFEQVEIS NEKPEVIKEG
410 420
CLFITPEMYH TDGFFIAKFK KIGE
Length:424
Mass (Da):47,950
Last modified:March 6, 2007 - v1
Checksum:i82724814F8EF6FE3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM406671 Genomic DNA. Translation: CAL98648.1.
RefSeqiWP_011835793.1. NC_009004.1.

Genome annotation databases

EnsemblBacteriaiCAL98648; CAL98648; llmg_2081.
KEGGillm:llmg_2081.
PATRICi22285352. VBILacLac4574_2128.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM406671 Genomic DNA. Translation: CAL98648.1.
RefSeqiWP_011835793.1. NC_009004.1.

3D structure databases

ProteinModelPortaliA2RMW2.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi416870.llmg_2081.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAL98648; CAL98648; llmg_2081.
KEGGillm:llmg_2081.
PATRICi22285352. VBILacLac4574_2128.

Phylogenomic databases

eggNOGiENOG4105CYJ. Bacteria.
COG0144. LUCA.
HOGENOMiHOG000037300.
KOiK03500.
OMAiHIGLYQL.

Family and domain databases

Gene3Di1.10.940.10. 1 hit.
3.40.50.150. 1 hit.
InterProiIPR018314. Fmu/NOL1/Nop2p_CS.
IPR001678. MeTrfase_RsmB/NOP2.
IPR006027. NusB_RsmB_TIM44.
IPR023267. RCMT.
IPR004573. rRNA_ssu_MeTfrase_B.
IPR029063. SAM-dependent_MTases.
[Graphical view]
PfamiPF01189. Methyltr_RsmB-F. 1 hit.
PF01029. NusB. 1 hit.
[Graphical view]
PRINTSiPR02008. RCMTFAMILY.
SUPFAMiSSF48013. SSF48013. 1 hit.
SSF53335. SSF53335. 1 hit.
TIGRFAMsiTIGR00563. rsmB. 1 hit.
PROSITEiPS01153. NOL1_NOP2_SUN. 1 hit.
PS51686. SAM_MT_RSMB_NOP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiA2RMW2_LACLM
AccessioniPrimary (citable) accession number: A2RMW2
Entry historyi
Integrated into UniProtKB/TrEMBL: March 6, 2007
Last sequence update: March 6, 2007
Last modified: November 30, 2016
This is version 71 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.