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Protein
Submitted name:

Superoxide dismutase

Gene

sodF

Organism
Bacillus amyloliquefaciens (Bacillus velezensis)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Superoxide dismutaseImported
Gene namesi
Name:sodFImported
OrganismiBacillus amyloliquefaciens (Bacillus velezensis)Imported
Taxonomic identifieri1390 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus

Interactioni

Protein-protein interaction databases

STRINGi326423.RBAM_019080.

Structurei

3D structure databases

SMRiA2RH35. Positions 75-275.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini79 – 15981Sod_Fe_NInterPro annotationAdd
BLAST
Domaini167 – 269103Sod_Fe_CInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiENOG4105CK4. Bacteria.
COG0605. LUCA.
OrthoDBiEOG63NMNT.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiPS00088. SOD_MN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A2RH35-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKRHAYQTEM LNWCETLKEQ VIQQGRFDRF AAQIDRIFHT LQDDGFTEAE
60 70 80 90 100
WYEQASALYR DITEPEEPDE RRAYVPIGKH VLPKLPYSYS ALEPYISREI
110 120 130 140 150
MKLHHTKHHQ SYVDGLNKAE LELKKARQTK QYDLVAHWER QLAFHGAGHY
160 170 180 190 200
LHSIFWFSMN PNGKRRPTGA LFQMIDASFG SYSAFKEQFS QAAKKVEGVG
210 220 230 240 250
WAILVWAPRA GRLEILAAEK HQLYSQWDVI PLLPLDVWEH AYYLQYKNDR
260 270 280
AAYVDQWWNV VDWREAEKRF EQAHRVIWPL Y
Length:281
Mass (Da):33,431
Last modified:March 6, 2007 - v1
Checksum:iAA9D35E4A2DA0205
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM295008 Genomic DNA. Translation: CAL26195.1.
RefSeqiWP_012117746.1. NZ_LGYP01000011.1.

Genome annotation databases

EnsemblBacteriaiKNX34063; KNX34063; AFK74_09570.
PATRICi18748892. VBIBacAmy31356_1921.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM295008 Genomic DNA. Translation: CAL26195.1.
RefSeqiWP_012117746.1. NZ_LGYP01000011.1.

3D structure databases

SMRiA2RH35. Positions 75-275.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi326423.RBAM_019080.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiKNX34063; KNX34063; AFK74_09570.
PATRICi18748892. VBIBacAmy31356_1921.

Phylogenomic databases

eggNOGiENOG4105CK4. Bacteria.
COG0605. LUCA.
OrthoDBiEOG63NMNT.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiPS00088. SOD_MN. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Tryptophan dependent production of Indole-3-acetic acid (IAA) affects level of plant growth promotion by Bacillus amyloliquefaciens FZB42."
    Idris E.E., Iglesias D.J., Talon M., Borriss R.
    Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: FZB42Imported.

Entry informationi

Entry nameiA2RH35_BACAM
AccessioniPrimary (citable) accession number: A2RH35
Entry historyi
Integrated into UniProtKB/TrEMBL: March 6, 2007
Last sequence update: March 6, 2007
Last modified: May 11, 2016
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.