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Protein
Submitted name:

Aspergillus niger contig An19c0010, genomic contig

Gene

An19g00090

Organism
Aspergillus niger (strain CBS 513.88 / FGSC A1513)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseImported, Hydrolase

Protein family/group databases

CAZyiGH55. Glycoside Hydrolase Family 55.

Names & Taxonomyi

Protein namesi
Submitted name:
Aspergillus niger contig An19c0010, genomic contigImported (EC:3.2.1.58Imported)
Gene namesi
ORF Names:An19g00090Imported
OrganismiAspergillus niger (strain CBS 513.88 / FGSC A1513)Imported
Taxonomic identifieri425011 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaPezizomycotinaEurotiomycetesEurotiomycetidaeEurotialesAspergillaceaeAspergillus
Proteomesi
  • UP000006706 Componenti: Chromosome 4ER

Organism-specific databases

EuPathDBiFungiDB:An19g00090.

Structurei

3D structure databases

ProteinModelPortaliA2RBJ4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini1107 – 115347LysMInterPro annotationAdd
BLAST
Domaini1159 – 121052LysMInterPro annotationAdd
BLAST
Domaini1256 – 130449LysMInterPro annotationAdd
BLAST

Phylogenomic databases

HOGENOMiHOG000216760.
OrthoDBiEOG76DV23.

Family and domain databases

Gene3Di2.160.20.10. 3 hits.
InterProiIPR018392. LysM_dom.
IPR024535. Pectate_lyase_SF_prot.
IPR012334. Pectin_lyas_fold.
IPR011050. Pectin_lyase_fold/virulence.
[Graphical view]
PfamiPF01476. LysM. 2 hits.
PF12708. Pectate_lyase_3. 2 hits.
[Graphical view]
SMARTiSM00257. LysM. 3 hits.
[Graphical view]
SUPFAMiSSF51126. SSF51126. 3 hits.
SSF54106. SSF54106. 2 hits.

Sequencei

Sequence statusi: Complete.

A2RBJ4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNEGRLAHPQ FNQYSFKAGA STVQAEAAPA LNYEDASTHN AAKNATKRSG
60 70 80 90 100
RKGDQTYTYS IPPELAEAAR LVAEASPQPV PTDYGVDISL VVSKYRKYDN
110 120 130 140 150
NDTNVPKQKY VEPNGLDGYV HTGQPEDSPE IHTELKKRAT TDFWLTQMGD
160 170 180 190 200
SGSSPYAPDG YKVWRNVRDY GAKGDGITDD TAAINKAISD GGRCGAECGS
210 220 230 240 250
STIYPAFVYF PAGKYLVSSP IIQYYNTEFY GNPFDYPTIL AASSFVGLGV
260 270 280 290 300
ITSDVYTGDD TEWYINQNNF LRSIRNFKMD ITRTDPNAYV CAIHWQVAQG
310 320 330 340 350
TSLENIEFYM MQDGLTTQQG IYMENGSGGF LTNLTFVGGN FGYVYAFSQR
360 370 380 390 400
CTPLSDLPSG HTLATQFTST SLTFMNCKTA LQVHWDWAWT MQDVVVENCT
410 420 430 440 450
NGIVIVGGAG GPKSTGQSVG SLILVDAVIA HTQTGIVTTL LAENSTSFLL
460 470 480 490 500
QGVVFIEVDT AILDSAQGKT LMAGGSNVPV FSWGFGRVVT TGAESTFYNG
510 520 530 540 550
QDIPRTNRSV PLTTIGYIEP NFYLRRRPTY RDIGMSQVIN VKDWGAAGDG
560 570 580 590 600
KTDDTAVLNS ILDRAANMSS IVFFPYGVYI IRDTLRVPVN SRIMGQVWSQ
610 620 630 640 650
IMATGPKFQD EQNPHIAVQV GQVGDRGIVE IQSLMFTVSG PTAGAVLMEW
660 670 680 690 700
NVHQVIQGSA GMWDSHFRVG GATGSQLQAD ECPKGSGVVL PACKAASLLL
710 720 730 740 750
HLTSQSSAYL ENIWLWVADH DLDLQDQAQI DVYSARGLLV ESQGPTWLYG
760 770 780 790 800
TASEHNVLYQ YQVSQARDLY MGMIQTESPY FQNVPPAPSP FSPGLFPNDP
810 820 830 840 850
TFSDCDSDSQ TCPVSWALRI IDSTSVYSMG AGIYSWFSAY SQDCLDTESC
860 870 880 890 900
QQHAVGISQS TNTWLYNLVT KGIAEMVTPT NEHPTLSADN VNGFMSSILA
910 920 930 940 950
WVRLANTTIG ARKFPGFQLY QPKWLDGLTD TCKTALSQKI LCHPYLEMKF
960 970 980 990 1000
SNPGIGQYID NNTLADEVCD QGCGESLQMW TTNVANSCLN QTIDDTDPVA
1010 1020 1030 1040 1050
AGGYIYAGYN LTCLRDPHTK KYCPDVLSHF TIVDSVRSMT LAEMCSYCFT
1060 1070 1080 1090 1100
TSLEMRQASP YAAYTDVDKD ALETVNAECG LSGPTDLHKP LYTEDEVDRP
1110 1120 1130 1140 1150
ICMSGITHTT SEGDTCDLLA YKYHVASAVI QLANPMLVND CSELIPGRQL
1160 1170 1180 1190 1200
CMPLSCDTQY TLQDNDTCLS IEWAQPIGFG EVRRYNPWLN VDCTNLQTTR
1210 1220 1230 1240 1250
QVHGSVLCLS PQGGSHNVTG TGSPCPGISD GYTNVVQYAP TNSTIAKGTT
1260 1270 1280 1290 1300
CYCGKWYTVQ QGDSCATICI KQGIPSSLFL AVNPSLSTSD CDTSLQVGYT
1310 1320
YCVGPDTHWD DTDNFWGEFA CEAY
Length:1,324
Mass (Da):144,675
Last modified:March 6, 2007 - v1
Checksum:i8F33CE51E6ADA7A7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM270415 Genomic DNA. Translation: CAK47332.1.

Genome annotation databases

EnsemblFungiiCADANGAT00014333; CADANGAP00014064; CADANGAG00014333.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM270415 Genomic DNA. Translation: CAK47332.1.

3D structure databases

ProteinModelPortaliA2RBJ4.
ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

CAZyiGH55. Glycoside Hydrolase Family 55.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiCADANGAT00014333; CADANGAP00014064; CADANGAG00014333.

Organism-specific databases

EuPathDBiFungiDB:An19g00090.

Phylogenomic databases

HOGENOMiHOG000216760.
OrthoDBiEOG76DV23.

Family and domain databases

Gene3Di2.160.20.10. 3 hits.
InterProiIPR018392. LysM_dom.
IPR024535. Pectate_lyase_SF_prot.
IPR012334. Pectin_lyas_fold.
IPR011050. Pectin_lyase_fold/virulence.
[Graphical view]
PfamiPF01476. LysM. 2 hits.
PF12708. Pectate_lyase_3. 2 hits.
[Graphical view]
SMARTiSM00257. LysM. 3 hits.
[Graphical view]
SUPFAMiSSF51126. SSF51126. 3 hits.
SSF54106. SSF54106. 2 hits.
ProtoNetiSearch...

Publicationsi

  1. "Genome sequencing and analysis of the versatile cell factory Aspergillus niger CBS 513.88."
    Pel H.J., de Winde J.H., Archer D.B., Dyer P.S., Hofmann G., Schaap P.J., Turner G., de Vries R.P., Albang R., Albermann K., Andersen M.R., Bendtsen J.D., Benen J.A., van den Berg M., Breestraat S., Caddick M.X., Contreras R., Cornell M.
    , Coutinho P.M., Danchin E.G., Debets A.J., Dekker P., van Dijck P.W., van Dijk A., Dijkhuizen L., Driessen A.J., d'Enfert C., Geysens S., Goosen C., Groot G.S., de Groot P.W., Guillemette T., Henrissat B., Herweijer M., van den Hombergh J.P., van den Hondel C.A., van der Heijden R.T., van der Kaaij R.M., Klis F.M., Kools H.J., Kubicek C.P., van Kuyk P.A., Lauber J., Lu X., van der Maarel M.J., Meulenberg R., Menke H., Mortimer M.A., Nielsen J., Oliver S.G., Olsthoorn M., Pal K., van Peij N.N., Ram A.F., Rinas U., Roubos J.A., Sagt C.M., Schmoll M., Sun J., Ussery D., Varga J., Vervecken W., van de Vondervoort P.J., Wedler H., Wosten H.A., Zeng A.P., van Ooyen A.J., Visser J., Stam H.
    Nat. Biotechnol. 25:221-231(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CBS 513.88 / FGSC A1513Imported.

Entry informationi

Entry nameiA2RBJ4_ASPNC
AccessioniPrimary (citable) accession number: A2RBJ4
Entry historyi
Integrated into UniProtKB/TrEMBL: March 6, 2007
Last sequence update: March 6, 2007
Last modified: July 6, 2016
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.