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A2QCU8

- SCONB_ASPNC

UniProt

A2QCU8 - SCONB_ASPNC

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Protein

Probable E3 ubiquitin ligase complex SCF subunit sconB

Gene

sconB

Organism
Aspergillus niger (strain CBS 513.88 / FGSC A1513)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Component of the SCF(sconB) E3 ubiquitin ligase complex involved in the regulation of sulfur metabolite repression, probably by mediating the inactivation or degradation of the metR transcription factor.By similarity

Pathwayi

GO - Biological processi

  1. protein ubiquitination Source: UniProtKB-UniPathway
  2. regulation of transcription, DNA-templated Source: UniProtKB-KW
  3. transcription, DNA-templated Source: UniProtKB-KW
Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulation, Ubl conjugation pathway

Enzyme and pathway databases

UniPathwayiUPA00143.

Names & Taxonomyi

Protein namesi
Recommended name:
Probable E3 ubiquitin ligase complex SCF subunit sconB
Alternative name(s):
Sulfur controller B
Sulfur metabolite repression control protein B
Gene namesi
Name:sconB
ORF Names:An02g04800
OrganismiAspergillus niger (strain CBS 513.88 / FGSC A1513)
Taxonomic identifieri425011 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaPezizomycotinaEurotiomycetesEurotiomycetidaeEurotialesAspergillaceaeAspergillus
ProteomesiUP000006706: Chromosome 4R

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 670670Probable E3 ubiquitin ligase complex SCF subunit sconBPRO_0000397249Add
BLAST

Interactioni

Subunit structurei

Component of the SCF(sconB) E3 ubiquitin ligase complex.By similarity

Protein-protein interaction databases

STRINGi5061.CADANGAP00001938.

Structurei

3D structure databases

ProteinModelPortaliA2QCU8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini163 – 20947F-boxPROSITE-ProRule annotationAdd
BLAST
Repeati339 – 37638WD 1Add
BLAST
Repeati379 – 41840WD 2Add
BLAST
Repeati420 – 45637WD 3Add
BLAST
Repeati458 – 49942WD 4Add
BLAST
Repeati553 – 59644WD 5Add
BLAST
Repeati599 – 63638WD 6Add
BLAST
Repeati639 – 67032WD 7Add
BLAST

Sequence similaritiesi

Contains 1 F-box domain.PROSITE-ProRule annotation
Contains 7 WD repeats.PROSITE-ProRule annotation

Keywords - Domaini

Repeat, WD repeat

Phylogenomic databases

eggNOGiCOG2319.
HOGENOMiHOG000166480.
OrthoDBiEOG7C5MHX.

Family and domain databases

Gene3Di2.130.10.10. 2 hits.
InterProiIPR001810. F-box_dom.
IPR020472. G-protein_beta_WD-40_rep.
IPR015943. WD40/YVTN_repeat-like_dom.
IPR001680. WD40_repeat.
IPR019775. WD40_repeat_CS.
IPR017986. WD40_repeat_dom.
[Graphical view]
PfamiPF12937. F-box-like. 1 hit.
PF00400. WD40. 7 hits.
[Graphical view]
PRINTSiPR00320. GPROTEINBRPT.
SMARTiSM00256. FBOX. 1 hit.
SM00320. WD40. 7 hits.
[Graphical view]
SUPFAMiSSF50978. SSF50978. 2 hits.
SSF81383. SSF81383. 2 hits.
PROSITEiPS50181. FBOX. 1 hit.
PS00678. WD_REPEATS_1. 4 hits.
PS50082. WD_REPEATS_2. 7 hits.
PS50294. WD_REPEATS_REGION. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A2QCU8-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSSPPPFTSI FGGPAESAEE IDADADNSQL KPHNRSNVTA TSAKLVGKSV
60 70 80 90 100
APFLAKHVPD QYAPLGSQNR EPAALSSANS RYCYRHRPDR KCRRQADEPT
110 120 130 140 150
MDKLQRELES LPQSDQQGIA HVWSLFSAAP AKHRKLILQG IMAQCCFPQL
160 170 180 190 200
SFISTTVRDL IRIDFIAALP PEISFKILCY LDTTSLCKAA QVSRRWRALA
210 220 230 240 250
DDDVVWHRMC EQHIHRKCKK CGWGLPLLDR KRLRESKREI EIRATTWDVN
260 270 280 290 300
GTSPKATPAL PEDASPVADS SGTGKRKPEP SEEETAVVKR HCQSLAMRPE
310 320 330 340 350
GSEDYFKTRY RPWKEVYKDR FKVGTNWKYG RCSIRIFKGH TNGVMCLQFE
360 370 380 390 400
DNILATGSYD ATIKIWDTDT GQEIRTLRGH ESGIRCLQFD DTKLISGSMD
410 420 430 440 450
GSVKVWNWRT GDCISTYTGH RGGVIGLHFD ATILASASVD KTVKIWNFED
460 470 480 490 500
KSTCLLRGHT DWVNAVRVDT ASRTVFSASD DCTVRLWDLD TKSCIRTFHG
510 520 530 540 550
HVGQVQQVVP LPREFEFEEH DVECENDNLS TVSGDTEPAS LQATLGLESN
560 570 580 590 600
AVISQSSPFG PSFESGRTAP PRYIVTSALD STIRLWETST GRCLRTFFGH
610 620 630 640 650
LEGVWALAAD TLRIVSGAED RMIKIWDPRT GKCERTFTGH SGPVTCIGLG
660 670
DSRFATGSED CEVRMYSFQS
Length:670
Mass (Da):74,900
Last modified:March 6, 2007 - v1
Checksum:i2C50BE2AE02D9BCC
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AM270009 Genomic DNA. Translation: CAK47657.1.

Genome annotation databases

EnsemblFungiiCADANGAT00001996; CADANGAP00001938; CADANGAG00001996.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AM270009 Genomic DNA. Translation: CAK47657.1 .

3D structure databases

ProteinModelPortali A2QCU8.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 5061.CADANGAP00001938.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblFungii CADANGAT00001996 ; CADANGAP00001938 ; CADANGAG00001996 .

Phylogenomic databases

eggNOGi COG2319.
HOGENOMi HOG000166480.
OrthoDBi EOG7C5MHX.

Enzyme and pathway databases

UniPathwayi UPA00143 .

Family and domain databases

Gene3Di 2.130.10.10. 2 hits.
InterProi IPR001810. F-box_dom.
IPR020472. G-protein_beta_WD-40_rep.
IPR015943. WD40/YVTN_repeat-like_dom.
IPR001680. WD40_repeat.
IPR019775. WD40_repeat_CS.
IPR017986. WD40_repeat_dom.
[Graphical view ]
Pfami PF12937. F-box-like. 1 hit.
PF00400. WD40. 7 hits.
[Graphical view ]
PRINTSi PR00320. GPROTEINBRPT.
SMARTi SM00256. FBOX. 1 hit.
SM00320. WD40. 7 hits.
[Graphical view ]
SUPFAMi SSF50978. SSF50978. 2 hits.
SSF81383. SSF81383. 2 hits.
PROSITEi PS50181. FBOX. 1 hit.
PS00678. WD_REPEATS_1. 4 hits.
PS50082. WD_REPEATS_2. 7 hits.
PS50294. WD_REPEATS_REGION. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Genome sequencing and analysis of the versatile cell factory Aspergillus niger CBS 513.88."
    Pel H.J., de Winde J.H., Archer D.B., Dyer P.S., Hofmann G., Schaap P.J., Turner G., de Vries R.P., Albang R., Albermann K., Andersen M.R., Bendtsen J.D., Benen J.A.E., van den Berg M., Breestraat S., Caddick M.X., Contreras R., Cornell M.
    , Coutinho P.M., Danchin E.G.J., Debets A.J.M., Dekker P., van Dijck P.W.M., van Dijk A., Dijkhuizen L., Driessen A.J.M., d'Enfert C., Geysens S., Goosen C., Groot G.S.P., de Groot P.W.J., Guillemette T., Henrissat B., Herweijer M., van den Hombergh J.P.T.W., van den Hondel C.A.M.J.J., van der Heijden R.T.J.M., van der Kaaij R.M., Klis F.M., Kools H.J., Kubicek C.P., van Kuyk P.A., Lauber J., Lu X., van der Maarel M.J.E.C., Meulenberg R., Menke H., Mortimer M.A., Nielsen J., Oliver S.G., Olsthoorn M., Pal K., van Peij N.N.M.E., Ram A.F.J., Rinas U., Roubos J.A., Sagt C.M.J., Schmoll M., Sun J., Ussery D., Varga J., Vervecken W., van de Vondervoort P.J.J., Wedler H., Woesten H.A.B., Zeng A.-P., van Ooyen A.J.J., Visser J., Stam H.
    Nat. Biotechnol. 25:221-231(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CBS 513.88 / FGSC A1513.

Entry informationi

Entry nameiSCONB_ASPNC
AccessioniPrimary (citable) accession number: A2QCU8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: August 10, 2010
Last sequence update: March 6, 2007
Last modified: October 1, 2014
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3