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A2NTY6

- A2NTY6_MOUSE

UniProt

A2NTY6 - A2NTY6_MOUSE

Protein
Submitted name:

Beta-chain

Gene
N/A
Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
  1. Names & Taxonomyi

    Protein namesi
    Submitted name:
    Beta-chainImported
    OrganismiMus musculus (Mouse)Imported
    Taxonomic identifieri10090 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 2929 PotentialImportedAdd
    BLAST
    Chaini30 – ›144›115beta-chainImportedPRO_5000218754Add
    BLAST

    Proteomic databases

    PRIDEiA2NTY6.

    Expressioni

    Gene expression databases

    GenevestigatoriA2NTY6.

    Interactioni

    Protein-protein interaction databases

    IntActiA2NTY6. 1 interaction.
    STRINGi10090.ENSMUSP00000100086.

    Structurei

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    2E7LX-ray2.50C/D30-144[»]
    2ICWX-ray2.41J/L30-144[»]
    2OI9X-ray2.35C30-144[»]
    2PXYX-ray2.23B32-144[»]
    2Z31X-ray2.70B32-123[»]
    2Z35X-ray2.20B32-144[»]
    3E2HX-ray3.80C31-144[»]
    ProteinModelPortaliA2NTY6.
    ModBaseiSearch...
    MobiDBiSearch...

    Miscellaneous databases

    EvolutionaryTraceiA2NTY6.

    Family & Domainsi

    Keywords - Domaini

    SignalImported

    Phylogenomic databases

    eggNOGiNOG123478.
    HOVERGENiHBG099362.

    Family and domain databases

    Gene3Di2.60.40.10. 1 hit.
    InterProiIPR007110. Ig-like_dom.
    IPR013783. Ig-like_fold.
    IPR013106. Ig_V-set.
    IPR003596. Ig_V-set_subgr.
    [Graphical view]
    PfamiPF07686. V-set. 1 hit.
    [Graphical view]
    SMARTiSM00406. IGv. 1 hit.
    [Graphical view]
    PROSITEiPS50835. IG_LIKE. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Fragment.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    A2NTY6-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSNTAFPDPA WNTTLLSWVA LFLLGTKHME AAVTQSPRNK VAVTGGKVTL    50
    SCNQTNNHNN MYWYRQDTGH GLRLIHYSYG AGSTEKGDIP DGYKASRPSQ 100
    ENFSLILELA TPSQTSVYFC ASGELGGFNQ DTQYFGPGTR LLVL 144
    Length:144
    Mass (Da):15,812
    Last modified:February 20, 2007 - v1
    Checksum:i4071AC8C0A490C60
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Non-terminal residuei144 – 1441Imported

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    X02784 mRNA. Translation: CAA26555.1.

    Genome annotation databases

    UCSCiuc009boa.2. mouse.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    X02784 mRNA. Translation: CAA26555.1 .

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    2E7L X-ray 2.50 C/D 30-144 [» ]
    2ICW X-ray 2.41 J/L 30-144 [» ]
    2OI9 X-ray 2.35 C 30-144 [» ]
    2PXY X-ray 2.23 B 32-144 [» ]
    2Z31 X-ray 2.70 B 32-123 [» ]
    2Z35 X-ray 2.20 B 32-144 [» ]
    3E2H X-ray 3.80 C 31-144 [» ]
    ProteinModelPortali A2NTY6.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    IntActi A2NTY6. 1 interaction.
    STRINGi 10090.ENSMUSP00000100086.

    Proteomic databases

    PRIDEi A2NTY6.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    UCSCi uc009boa.2. mouse.

    Phylogenomic databases

    eggNOGi NOG123478.
    HOVERGENi HBG099362.

    Miscellaneous databases

    EvolutionaryTracei A2NTY6.
    NextBioi 35544479.

    Gene expression databases

    Genevestigatori A2NTY6.

    Family and domain databases

    Gene3Di 2.60.40.10. 1 hit.
    InterProi IPR007110. Ig-like_dom.
    IPR013783. Ig-like_fold.
    IPR013106. Ig_V-set.
    IPR003596. Ig_V-set_subgr.
    [Graphical view ]
    Pfami PF07686. V-set. 1 hit.
    [Graphical view ]
    SMARTi SM00406. IGv. 1 hit.
    [Graphical view ]
    PROSITEi PS50835. IG_LIKE. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The murine T-cell receptor uses a limited repertoire of expressed V beta gene segments."
      Barth R.K., Kim B.S., Lan N.C., Hunkapiller T., Sobieck N., Winoto A., Gershennffeld H., Okada C., Hansburg D., Weissman I.L., Hood L.
      Nature 316:517-523(1985) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/KaImported.
    2. "How a single T cell receptor recognizes both self and foreign MHC."
      Colf L.A., Bankovich A.J., Hanick N.A., Bowerman N.A., Jones L.L., Kranz D.M., Garcia K.C.
      Cell 129:135-146(2007) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (2.35 ANGSTROMS) OF 30-144.
    3. "Structural evidence for a germline-encoded T cell receptor-major histocompatibility complex interaction 'codon'."
      Feng D., Bond C.J., Ely L.K., Maynard J., Garcia K.C.
      Nat. Immunol. 8:975-983(2007) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (2.20 ANGSTROMS) OF 32-144.
    4. "Crystal structure of a complete ternary complex of TCR, superantigen and peptide-MHC."
      Wang L., Zhao Y., Li Z., Guo Y., Jones L.L., Kranz D.M., Mourad W., Li H.
      Nat. Struct. Mol. Biol. 14:169-171(2007) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (2.41 ANGSTROMS) OF 30-144.
    5. "Distinct CDR3 conformations in TCRs determine the level of cross-reactivity for diverse antigens, but not the docking orientation."
      Jones L.L., Colf L.A., Stone J.D., Garcia K.C., Kranz D.M.
      J. Immunol. 181:6255-6264(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (3.80 ANGSTROMS) OF 31-144.

    Entry informationi

    Entry nameiA2NTY6_MOUSE
    AccessioniPrimary (citable) accession number: A2NTY6
    Entry historyi
    Integrated into UniProtKB/TrEMBL: February 20, 2007
    Last sequence update: February 20, 2007
    Last modified: October 1, 2014
    This is version 39 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    3D-structureImported

    External Data

    Dasty 3