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A2FNR0

- A2FNR0_TRIVA

UniProt

A2FNR0 - A2FNR0_TRIVA

Protein

Alpha-amylase

Gene

TVAG_347480

Organism
Trichomonas vaginalis
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 38 (01 Oct 2014)
      Sequence version 1 (20 Feb 2007)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

    GO - Molecular functioni

    1. alpha-amylase activity Source: UniProtKB-EC
    2. cation binding Source: InterPro

    GO - Biological processi

    1. carbohydrate metabolic process Source: UniProtKB-KW

    Keywords - Molecular functioni

    GlycosidaseUniRule annotation, Hydrolase

    Keywords - Biological processi

    Carbohydrate metabolismUniRule annotation

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
    Gene namesi
    ORF Names:TVAG_347480Imported
    OrganismiTrichomonas vaginalisImported
    Taxonomic identifieri5722 [NCBI]
    Taxonomic lineageiEukaryotaParabasaliaTrichomonadidaTrichomonadidaeTrichomonas
    ProteomesiUP000001542: Unassembled WGS genome

    Organism-specific databases

    EuPathDBiTrichDB:TVAG_347480.

    Interactioni

    Protein-protein interaction databases

    STRINGi5722.A2FNR0.

    Structurei

    3D structure databases

    ProteinModelPortaliA2FNR0.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 13 family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0366.
    KOiK01176.

    Family and domain databases

    Gene3Di3.20.20.80. 1 hit.
    InterProiIPR006046. Alpha_amylase.
    IPR015902. Glyco_hydro_13.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    [Graphical view]
    PRINTSiPR00110. ALPHAAMYLASE.
    SUPFAMiSSF51445. SSF51445. 2 hits.

    Sequencei

    Sequence statusi: Complete.

    A2FNR0-1 [UniParc]FASTAAdd to Basket

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    MKELADNPLL DSQDELESVE RESEVPFYKK NYFIYGTMIC NSILIGAIIS    50
    MIITFSVNSK VSSISNQYDT LPNCESYSSF TCNGSSSSMD YKYYNNTWNT 100
    PKRGQDLWKP GFQDMSTLVG YAQLKYASGM KSCTVNILTK TSTSLNLTYY 150
    FDDVAQTSNS KTFDSSYTKT LSVKVVAESG ETLILDGVDF IWNVASIKSR 200
    DYDYRKGQKG AIVELFGWPD DDVAQECKFI ADAGYMGVKI FPHQEQIMSY 250
    QPMENMMNPW YFMYQPVSYR LQGRMGTRDQ LRTMINTCRA LGVRVYADAV 300
    VNHMSGNGND LSNHRNSGSG CTTWGNKTSS AYENGSPYYT PAYTYETNPN 350
    TGRGTNVLEY PGVPYGPEDF HCDKALNSWN DANILDSGWL SGLADLDTSK 400
    EYVRQRIADF MIDLISIGFS GYRVDAAKHI RPTDLAAIFG KVKEGLGGSL 450
    PDDFISWLEV LTGGESQLLV QGDGDYSFTG GLTKYLKANN FTDDDVLKIK 500
    IWWSGYPSEP NNDNGSLDIR RKAIQNDDHD QQSDGSSSRD MHDQGCVLIK 550
    GCDASTHRSF EVKLFESPNG LSNQNGPFII L 581
    Length:581
    Mass (Da):64,940
    Last modified:February 20, 2007 - v1
    Checksum:i27E0D5896D09CE28
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    DS113911 Genomic DNA. Translation: EAX93461.1.
    RefSeqiXP_001306391.1. XM_001306390.1.

    Genome annotation databases

    GeneIDi4751179.
    KEGGitva:TVAG_347480.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    DS113911 Genomic DNA. Translation: EAX93461.1 .
    RefSeqi XP_001306391.1. XM_001306390.1.

    3D structure databases

    ProteinModelPortali A2FNR0.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 5722.A2FNR0.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 4751179.
    KEGGi tva:TVAG_347480.

    Organism-specific databases

    EuPathDBi TrichDB:TVAG_347480.

    Phylogenomic databases

    eggNOGi COG0366.
    KOi K01176.

    Family and domain databases

    Gene3Di 3.20.20.80. 1 hit.
    InterProi IPR006046. Alpha_amylase.
    IPR015902. Glyco_hydro_13.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    [Graphical view ]
    PRINTSi PR00110. ALPHAAMYLASE.
    SUPFAMi SSF51445. SSF51445. 2 hits.
    ProtoNeti Search...

    Publicationsi

    1. "Draft genome sequence of the sexually transmitted pathogen Trichomonas vaginalis."
      Carlton J.M., Hirt R.P., Silva J.C., Delcher A.L., Schatz M., Zhao Q., Wortman J.R., Bidwell S.L., Alsmark U.C.M., Besteiro S., Sicheritz-Ponten T., Noel C.J., Dacks J.B., Foster P.G., Simillion C., Van de Peer Y., Miranda-Saavedra D., Barton G.J.
      , Westrop G.D., Mueller S., Dessi D., Fiori P.L., Ren Q., Paulsen I., Zhang H., Bastida-Corcuera F.D., Simoes-Barbosa A., Brown M.T., Hayes R.D., Mukherjee M., Okumura C.Y., Schneider R., Smith A.J., Vanacova S., Villalvazo M., Haas B.J., Pertea M., Feldblyum T.V., Utterback T.R., Shu C.L., Osoegawa K., de Jong P.J., Hrdy I., Horvathova L., Zubacova Z., Dolezal P., Malik S.B., Logsdon J.M. Jr., Henze K., Gupta A., Wang C.C., Dunne R.L., Upcroft J.A., Upcroft P., White O., Salzberg S.L., Tang P., Chiu C.-H., Lee Y.-S., Embley T.M., Coombs G.H., Mottram J.C., Tachezy J., Fraser-Liggett C.M., Johnson P.J.
      Science 315:207-212(2007) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC PRA-98 / G3Imported.

    Entry informationi

    Entry nameiA2FNR0_TRIVA
    AccessioniPrimary (citable) accession number: A2FNR0
    Entry historyi
    Integrated into UniProtKB/TrEMBL: February 20, 2007
    Last sequence update: February 20, 2007
    Last modified: October 1, 2014
    This is version 38 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3