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Protein

40S ribosomal protein S4

Gene

TVAG_335480

Organism
Trichomonas vaginalis
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal proteinUniRule annotationImported, RNA-binding, rRNA-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
40S ribosomal protein S4UniRule annotation
Gene namesi
ORF Names:TVAG_335480Imported
OrganismiTrichomonas vaginalisImported
Taxonomic identifieri5722 [NCBI]
Taxonomic lineageiEukaryotaParabasaliaTrichomonadidaTrichomonadidaeTrichomonas
Proteomesi
  • UP000001542 Componenti: Unassembled WGS sequence

Organism-specific databases

EuPathDBiTrichDB:TVAG_335480.

Subcellular locationi

GO - Cellular componenti

Interactioni

Protein-protein interaction databases

STRINGi412133.XP_001310418.1.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini42 – 102S4 RNA-bindingInterPro annotationAdd BLAST61

Sequence similaritiesi

Belongs to the eukaryotic ribosomal protein eS4 family.UniRule annotation

Phylogenomic databases

eggNOGiKOG0378. Eukaryota.
COG1471. LUCA.
InParanoidiA2FC75.
KOiK02987.

Family and domain databases

Gene3Di3.10.290.10. 1 hit.
HAMAPiMF_00485. Ribosomal_S4e. 1 hit.
InterProiView protein in InterPro
IPR032277. 40S_S4_C.
IPR005824. KOW.
IPR000876. Ribosomal_S4e.
IPR013845. Ribosomal_S4e_central_region.
IPR013843. Ribosomal_S4e_N.
IPR002942. S4_RNA-bd.
PANTHERiPTHR11581. PTHR11581. 1 hit.
PfamiView protein in Pfam
PF16121. 40S_S4_C. 1 hit.
PF00900. Ribosomal_S4e. 1 hit.
PF08071. RS4NT. 1 hit.
PF01479. S4. 1 hit.
PIRSFiPIRSF002116. Ribosomal_S4. 1 hit.
ProDomiView protein in ProDom or Entries sharing at least one domain
PD002667. Ribosomal_S4e_central. 1 hit.
SMARTiView protein in SMART
SM00739. KOW. 1 hit.
PROSITEiView protein in PROSITE
PS50889. S4. 1 hit.

Sequencei

Sequence statusi: Complete.

A2FC75-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPRCQRFHLK RLTAPHHWLL AKSAGKFASH PSTGPHKLRE CLPINIFLRD
60 70 80 90 100
RLKYALTAKE AVAIVKRRLV KVDGKVRTNY RYPTGLMDVI GLGKSNELFR
110 120 130 140 150
IIYDCKGRFC VHHIEAKEAS FKLLRVNQFK IGAKGIPHVV THDGRTISYV
160 170 180 190 200
DPSVRVHDAL KFNIKTGEVE SVIKFKVGDV AMVTAGGNVG RVGTIQKIEK
210 220 230 240 250
QMASFDIVHL KDTSGAVFAT RIMNVFVIGE NEHPLISLPA REGVRPSILE

GINQE
Length:255
Mass (Da):28,536
Last modified:February 20, 2007 - v1
Checksum:iBB30024F434337E3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DS113713 Genomic DNA. Translation: EAX97488.1.
RefSeqiXP_001310418.1. XM_001310417.1.

Genome annotation databases

EnsemblProtistsiEAX97488; EAX97488; TVAG_335480.
GeneIDi4755273.
KEGGitva:TVAG_335480.

Similar proteinsi

Entry informationi

Entry nameiA2FC75_TRIVA
AccessioniPrimary (citable) accession number: A2FC75
Entry historyiIntegrated into UniProtKB/TrEMBL: February 20, 2007
Last sequence update: February 20, 2007
Last modified: July 5, 2017
This is version 46 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported