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Protein

40S ribosomal protein SA

Gene

TVAG_240050

Organism
Trichomonas vaginalis
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA-precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal proteinUniRule annotationSAAS annotationImported

Names & Taxonomyi

Protein namesi
Recommended name:
40S ribosomal protein SAUniRule annotation
Gene namesi
ORF Names:TVAG_240050Imported, TVAG_474410Imported
OrganismiTrichomonas vaginalisImported
Taxonomic identifieri5722 [NCBI]
Taxonomic lineageiEukaryotaParabasaliaTrichomonadidaTrichomonadidaeTrichomonas
Proteomesi
  • UP000001542 Componenti: Unassembled WGS sequence

Subcellular locationi

A2EFE7:
  • Cytoplasm UniRule annotationSAAS annotation

GO - Cellular componenti

Keywords - Cellular componenti

CytoplasmUniRule annotationSAAS annotation

Interactioni

Subunit structurei

Component of the small ribosomal subunit. Mature ribosomes consist of a small (40S) and a large (60S) subunit. The 40S subunit contains about 33 different proteins and 1 molecule of RNA (18S). The 60S subunit contains about 49 different proteins and 3 molecules of RNA (25S, 5.8S and 5S). Interacts with ribosomal protein S21.UniRule annotation

Protein-protein interaction databases

STRINGi412133.XP_001320867.1.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
5XYIelectron microscopy3.35A1-256[»]
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the universal ribosomal protein uS2 family.UniRule annotationSAAS annotation

Phylogenomic databases

eggNOGiKOG0830. Eukaryota.
COG0052. LUCA.
KOiK02998.

Family and domain databases

CDDicd01425. RPS2. 1 hit.
HAMAPiMF_03015. Ribosomal_S2_euk. 1 hit.
InterProiView protein in InterPro
IPR001865. Ribosomal_S2.
IPR018130. Ribosomal_S2_CS.
IPR027498. Ribosomal_S2_euk.
IPR005707. Ribosomal_S2_euk/arc.
IPR023591. Ribosomal_S2_flav_dom.
PANTHERiPTHR11489. PTHR11489. 1 hit.
PfamiView protein in Pfam
PF00318. Ribosomal_S2. 2 hits.
PRINTSiPR00395. RIBOSOMALS2.
SUPFAMiSSF52313. SSF52313. 1 hit.
TIGRFAMsiTIGR01012. uS2_euk_arch. 1 hit.
PROSITEiView protein in PROSITE
PS00962. RIBOSOMAL_S2_1. 1 hit.
PS00963. RIBOSOMAL_S2_2. 1 hit.

Sequencei

Sequence statusi: Complete.

A2EFE7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTTAANADRE AVIKMMLAAK VYLGSTNLSF GMKPYVFTCR KDGTHVINLA
60 70 80 90 100
MTYEKIKLAA RMIYAVEEPK DVLAISTKSF GTRAVHKFAE FLGANYVEQR
110 120 130 140 150
FTPGLFTNYS IKNFCEPRLM IVCDPNTDSQ AVHEAAYANI PCIALCDTDA
160 170 180 190 200
HLDYVDCVIP CNTKNKNSMG LVMWLLTREV LRLRGALTRT QEWSVLPDLF
210 220 230 240 250
FYRDAADEAK IAEALEAEGE ETVSEEGAII NAAVPKAEIK AGATNEEWEN

KQEWDA
Length:256
Mass (Da):28,554
Last modified:February 20, 2007 - v1
Checksum:i40A2A7C945296990
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DS113481 Genomic DNA. Translation: EAY04235.1.
DS113374 Genomic DNA. Translation: EAY08644.1.
RefSeqiXP_001316458.1. XM_001316423.1.
XP_001320867.1. XM_001320832.1.

Genome annotation databases

EnsemblProtistsiEAY04235; EAY04235; TVAG_474410.
EAY08644; EAY08644; TVAG_240050.
GeneIDi4762090.
4766549.
KEGGitva:TVAG_240050.
tva:TVAG_474410.

Similar proteinsi

Entry informationi

Entry nameiA2EFE7_TRIVA
AccessioniPrimary (citable) accession number: A2EFE7
Entry historyiIntegrated into UniProtKB/TrEMBL: February 20, 2007
Last sequence update: February 20, 2007
Last modified: October 25, 2017
This is version 62 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported