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A2DFX6 (A2DFX6_TRIVA) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 46. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
DNA ligase RuleBase RU000617

EC=6.5.1.1 RuleBase RU000617
Gene names
ORF Names:TVAG_162990 EMBL EAY20603.1
OrganismTrichomonas vaginalis [Reference proteome]
Taxonomic identifier5722 [NCBI]
Taxonomic lineageEukaryotaParabasaliaTrichomonadidaTrichomonadidaeTrichomonas

Protein attributes

Sequence length679 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m). RuleBase RU000617

Sequence similarities

Belongs to the ATP-dependent DNA ligase family.

Sequences

Sequence LengthMass (Da)Tools
A2DFX6 [UniParc].

Last modified February 20, 2007. Version 1.
Checksum: D0BDA8ADE832366C

FASTA67977,200
        10         20         30         40         50         60 
MTQQGIAKFF GGKDIESTKK NAIVRKQVNV NISDFDNVFK DVEIPTVEGY NIPRDVVGYV 

        70         80         90        100        110        120 
AWNRGDPIPF TFITKMVDEL EPLTGKLEIN DLLCKYFLAI LMTTPKDIVP FVFLCLGQLR 

       130        140        150        160        170        180 
PNHEGVKINI GQESIISALG DKKVVKEKLK KEGDLSKVAQ QIRSTQKSMT SMFGKVNEAY 

       190        200        210        220        230        240 
TITGVYKEFL KMAGFQGANS DRNRTQTIQK LLTNCKPEEV KCIVRMLECK LRVGAAHESF 

       250        260        270        280        290        300 
LFALGMAFRR REYIMGMIKN NPDEEDLKDH GHLFREIYYR YPIIDEILVE FLRGSFKGAE 

       310        320        330        340        350        360 
KNINIKVGIP AMPMLAKPAK KLDEIKRRLG DGRITGEYKY DGERAQIHKN KEGKVRIFSR 

       370        380        390        400        410        420 
SAEDSTAKFA DVADIITDNV KGEQYILDSE IVAYDPEKHV ILPFQTLMNR PKKGTDTPSA 

       430        440        450        460        470        480 
IHVCVCAFDL LSYNGVSMLD EPLEKRRDKL HEIVTVVPTK LQLATYKNAS KIEDLGDFFE 

       490        500        510        520        530        540 
EAVSNRTEGL MVKTLNGRYE CGKRAMSWAK LKKDYISKEV FKGGVAEEIP PDTIDVVVIG 

       550        560        570        580        590        600 
ATYGKGKRTS VYGAFLVGVY NNVTGKVESL CFVGTGFKED DLKEFYEKLH PLEMEKCPDN 

       610        620        630        640        650        660 
VDCRPLDQDP VFFKPELVWE IQVADIQTTP TYSACWGELG EKGLTIRFGR YYRTRTDKTW 

       670 
EQSTSTEQLL ELYHQQFEK 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
DS113196 Genomic DNA. Translation: EAY20603.1.
RefSeqXP_001581589.1. XM_001581539.1.

3D structure databases

ProteinModelPortalA2DFX6.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING5722.A2DFX6.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5466150.
KEGGtva:TVAG_162990.

Organism-specific databases

EuPathDBTrichDB:TVAG_162990.

Phylogenomic databases

eggNOGCOG1793.
KOK10747.

Family and domain databases

Gene3D1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
InterProIPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR00574. dnl1. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA2DFX6_TRIVA
AccessionPrimary (citable) accession number: A2DFX6
Entry history
Integrated into UniProtKB/TrEMBL: February 20, 2007
Last sequence update: February 20, 2007
Last modified: October 16, 2013
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)