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A2CBD0 (A2CBD0_PROM3) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 42. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Glycine--tRNA ligase alpha subunit HAMAP-Rule MF_00254
EC=6.1.1.14 HAMAP-Rule MF_00254
Alternative name(s):
Glycyl-tRNA synthetase alpha subunit HAMAP-Rule MF_00254
Gene names
Name:glyQ HAMAP-Rule MF_00254
Ordered Locus Names:P9303_20541
OrganismProchlorococcus marinus (strain MIT 9303) [Complete proteome] [HAMAP] EMBL ABM78790.1
Taxonomic identifier59922 [NCBI]
Taxonomic lineageBacteria › Cyanobacteria › Prochlorales › Prochlorococcaceae › Prochlorococcus ›

Protein attributes

Sequence length318 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + glycine + tRNA(Gly) = AMP + diphosphate + glycyl-tRNA(Gly). HAMAP-Rule MF_00254 SAAS SAAS002310

Subunit structure

Tetramer of two alpha and two beta subunits By similarity. HAMAP-Rule MF_00254 SAAS SAAS002310

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00254 SAAS SAAS002310.

Sequence similarities

Belongs to the class-II aminoacyl-tRNA synthetase family. HAMAP-Rule MF_00254

Sequences

Sequence LengthMass (Da)Tools
A2CBD0 [UniParc].

Last modified February 20, 2007. Version 1.
Checksum: D1CD43AF97A1A73E

FASTA31835,954
        10         20         30         40         50         60 
MDNRNTIQLQ SKPLRTALVH FQDIITSLNS FWADQGCVLL QPYDTEKGAG TMSPHTVLRA 

        70         80         90        100        110        120 
IGPEPWAVAY PEPCRRPTDG RYGDNPNRAQ HYFQYQVLIK PSPVGIQETY LASLEALGVC 

       130        140        150        160        170        180 
TAEHDIRFVE DNWESPTLGA WGVGWEVWLD GMEVTQFTYF QQCGGIDCSP VPIEITYGIE 

       190        200        210        220        230        240 
RLAMYLQNVE NIWDLSWNNK RSYGDIWLSL EKGQCDFNFE SSDPCRLKQL FDLYEAEASD 

       250        260        270        280        290        300 
LIAKQLPAPA LDFVLKCSHT FNLLEARGVI SVTERTATIG RIRSLARGVA EAWLTEREVM 

       310 
GFPLLNDRAL ALDQPLQS

« Hide

References

[1]"Patterns and implications of gene gain and loss in the evolution of Prochlorococcus."
Kettler G.C., Martiny A.C., Huang K., Zucker J., Coleman M.L., Rodrigue S., Chen F., Lapidus A., Ferriera S., Johnson J., Steglich C., Church G.M., Richardson P., Chisholm S.W.
PLoS Genet. 3:E231-E231(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: MIT 9303.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000554 Genomic DNA. Translation: ABM78790.1.
RefSeqYP_001018055.1. NC_008820.1.

3D structure databases

ProteinModelPortalA2CBD0.
SMRA2CBD0. Positions 20-298.
ModBaseSearch...

Protein-protein interaction databases

STRING59922.P9303_20541.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABM78790; ABM78790; P9303_20541.
GeneID4776409.
KEGGpmf:P9303_20541.
PATRIC23001617. VBIProMar17757_2112.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0752.
HOGENOMHOG000264291.
KOK01878.
OMACVILQPY.
ProtClustDBPRK09348.

Enzyme and pathway databases

BioCycPMAR59922:GH54-2155-MONOMER.

Family and domain databases

HAMAPMF_00254. Gly_tRNA_synth_alpha.
InterProIPR006194. Gly-tRNA-synth_heterodimer.
IPR002310. Gly-tRNA_ligase_asu.
[Graphical view]
PfamPF02091. tRNA-synt_2e. 1 hit.
[Graphical view]
PRINTSPR01044. TRNASYNTHGA.
TIGRFAMsTIGR00388. glyQ. 1 hit.
PROSITEPS50861. AA_TRNA_LIGASE_II_GLYAB. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA2CBD0_PROM3
AccessionPrimary (citable) accession number: A2CBD0
Entry history
Integrated into UniProtKB/TrEMBL: February 20, 2007
Last sequence update: February 20, 2007
Last modified: May 1, 2013
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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