A2CBD0 (A2CBD0_PROM3) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Glycine--tRNA ligase alpha subunit HAMAP MF_00254
EC=6.1.1.14 HAMAP MF_00254

Alternative name(s):
Glycyl-tRNA synthetase alpha subunit HAMAP MF_00254

Gene names

Name:	glyQ HAMAP MF_00254
Ordered Locus Names:	P9303_20541

Organism

Prochlorococcus marinus (strain MIT 9303) [Complete proteome] [HAMAP] EMBL ABM78790.1

Taxonomic identifier

59922 [NCBI]

Taxonomic lineage

Bacteria › Cyanobacteria › Prochlorophytes › Prochlorococcaceae › Prochlorococcus

Protein attributes

Sequence length	318 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	ATP + glycine + tRNA(Gly) = AMP + diphosphate + glycyl-tRNA(Gly). HAMAP MF_00254
Subunit structure	Tetramer of two alpha and two beta subunits By similarity. HAMAP MF_00254
Subcellular location	Cytoplasm By similarity HAMAP MF_00254.
Sequence similarities	Belongs to the class-II aminoacyl-tRNA synthetase family. HAMAP MF_00254

Ontologies

Keywords
Biological process	Protein biosynthesis HAMAP MF_00254
Cellular component	Cytoplasm HAMAP MF_00254
Ligand	ATP-binding HAMAP MF_00254 Nucleotide-binding
Molecular function	Aminoacyl-tRNA synthetase HAMAP MF_00254 EMBL ABM78790.1 Ligase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	glycyl-tRNA aminoacylation Inferred from electronic annotation. Source: HAMAP
Cellular component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular function	ATP binding Inferred from electronic annotation. Source: HAMAP glycine-tRNA ligase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A2CBD0 [UniParc]. Last modified February 20, 2007. Version 1. Checksum: D1CD43AF97A1A73E	FASTA	318	35,954
	10 20 30 40 50 60 MDNRNTIQLQ SKPLRTALVH FQDIITSLNS FWADQGCVLL QPYDTEKGAG TMSPHTVLRA 70 80 90 100 110 120 IGPEPWAVAY PEPCRRPTDG RYGDNPNRAQ HYFQYQVLIK PSPVGIQETY LASLEALGVC 130 140 150 160 170 180 TAEHDIRFVE DNWESPTLGA WGVGWEVWLD GMEVTQFTYF QQCGGIDCSP VPIEITYGIE 190 200 210 220 230 240 RLAMYLQNVE NIWDLSWNNK RSYGDIWLSL EKGQCDFNFE SSDPCRLKQL FDLYEAEASD 250 260 270 280 290 300 LIAKQLPAPA LDFVLKCSHT FNLLEARGVI SVTERTATIG RIRSLARGVA EAWLTEREVM 310 GFPLLNDRAL ALDQPLQS

References

[1]

"Patterns and implications of gene gain and loss in the evolution of Prochlorococcus." Kettler G.C., Martiny A.C., Huang K., Zucker J., Coleman M.L., Rodrigue S., Chen F., Lapidus A., Ferriera S., Johnson J., Steglich C., Church G.M., Richardson P., Chisholm S.W. PLoS Genet. 3:2515-2528(2007) [PubMed: 18159947] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000554 Genomic DNA. Translation: ABM78790.1.
RefSeq	YP_001018055.1. NC_008820.1.
3D structure databases
ProteinModelPortal	A2CBD0.
SMR	A2CBD0. Positions 20-298.
ModBase	Search...
Protein-protein interaction databases
STRING	A2CBD0.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4776409.
GenomeReviews	Gene locus P9303_20541 in contig CP000554_GR.
KEGG	pmf:P9303_20541.
PATRIC	23001617. VBIProMar17757_2112.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0752.
HOGENOM	HBG285316.
OMA	CRRPTDG.
PhylomeDB	A2CBD0.
ProtClustDB	PRK09348.
Family and domain databases
HAMAP	MF_00254. Gly_tRNA_synth_alpha. [Tree]
InterPro	IPR006194. Gly-tRNA-synth_II_heterodimer. IPR002310. Gly-tRNA_synth_IIc_asu. [Graphical view]
KO	K01878.
Pfam	PF02091. tRNA-synt_2e. 1 hit. [Graphical view]
PRINTS	PR01044. TRNASYNTHGA.
TIGRFAMs	TIGR00388. GlyQ. 1 hit.
PROSITE	PS50861. AA_TRNA_LIGASE_II_GLYAB. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A2CBD0_PROM3

Accession

Primary (citable) accession number: A2CBD0

Entry history

Integrated into UniProtKB/TrEMBL:	February 20, 2007
Last sequence update:	February 20, 2007
Last modified:	January 25, 2012
This is version 33 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)