Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

ABC transporter, multi drug efflux family protein

Gene

P9303_00861

Organism
Prochlorococcus marinus (strain MIT 9303)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Ligandi

ATP-bindingUniRule annotation, Nucleotide-binding

Enzyme and pathway databases

BioCyciPMAR59922:GH54-139-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ABC transporter, multi drug efflux family proteinImported
Gene namesi
Ordered Locus Names:P9303_00861Imported
OrganismiProchlorococcus marinus (strain MIT 9303)Imported
Taxonomic identifieri59922 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaProchloralesProchlorococcaceaeProchlorococcus
Proteomesi
  • UP000002274 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei418 – 44427HelicalSequence analysisAdd
BLAST
Transmembranei456 – 48227HelicalSequence analysisAdd
BLAST
Transmembranei534 – 55421HelicalSequence analysisAdd
BLAST
Transmembranei560 – 58021HelicalSequence analysisAdd
BLAST
Transmembranei656 – 68126HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Structurei

3D structure databases

ProteinModelPortaliA2C5T3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini26 – 11388Cyclic nucleotide-bindingInterPro annotationAdd
BLAST
Domaini274 – 390117Peptidase C39InterPro annotationAdd
BLAST
Domaini420 – 701282ABC transmembrane type-1InterPro annotationAdd
BLAST
Domaini736 – 971236ABC transporterInterPro annotationAdd
BLAST

Sequence similaritiesi

Contains 1 ABC transporter domain.UniRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

KOiK06147.
OMAiNAKTQSH.
OrthoDBiEOG6T7N3V.

Family and domain databases

Gene3Di2.60.120.10. 1 hit.
3.40.50.300. 1 hit.
InterProiIPR003593. AAA+_ATPase.
IPR011527. ABC1_TM_dom.
IPR003439. ABC_transporter-like.
IPR017871. ABC_transporter_CS.
IPR010132. ATPase_T1SS_HlyB.
IPR018490. cNMP-bd-like.
IPR000595. cNMP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005074. Peptidase_C39.
IPR014710. RmlC-like_jellyroll.
[Graphical view]
PfamiPF00664. ABC_membrane. 1 hit.
PF00005. ABC_tran. 1 hit.
PF00027. cNMP_binding. 1 hit.
[Graphical view]
SMARTiSM00382. AAA. 1 hit.
[Graphical view]
SUPFAMiSSF51206. SSF51206. 1 hit.
SSF52540. SSF52540. 1 hit.
SSF90123. SSF90123. 1 hit.
TIGRFAMsiTIGR01846. type_I_sec_HlyB. 1 hit.
PROSITEiPS50929. ABC_TM1F. 1 hit.
PS00211. ABC_TRANSPORTER_1. 1 hit.
PS50893. ABC_TRANSPORTER_2. 1 hit.
PS50042. CNMP_BINDING_3. 1 hit.
PS50990. PEPTIDASE_C39. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A2C5T3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTLANLNHPL APLQNALQTK GERLKFQIGQ SLCEENYLPG HVLLIESGTA
60 70 80 90 100
RLLGNRDGRL TTRIKLESGS LIGAVSLLRG ESCEAVRAAT ELLAWSITDA
110 120 130 140 150
TFQQLYNSEK DIRDCCEAYL WDAEVAALLQ GIRASTPKSH HSLEAWLKML
160 170 180 190 200
GPLATLMHAN NDEAEAALNN GKRLFLASSI PSCPINTELD SIAAIRELSK
210 220 230 240 250
PQSGFCLRVI ALPADSLATL LRPAVDSKSN AALQNDEETP ETTLSLAPSR
260 270 280 290 300
PPVSSLNSPS SSEDFFVGGQ GPLQETLACF QMLAKLMKLP FRRDSIEKML
310 320 330 340 350
RDSLRRGQTP TLRMCGQIAA GLGLHVAGAK VPALMGTRLQ TPTLVPWKQS
360 370 380 390 400
FALVTRSDQL GLTLASPSEG FIKLDPSQLE EAFPEGIELL LLDRSNTTPE
410 420 430 440 450
QAFGPSWFWP ALQRYRGVLI QVLIAGFVVQ LFTLANPLLI QVIIDKVINQ
460 470 480 490 500
RSLDTLQILG FALVIVTVLE GVLGSLKTFL FAETTNRIDQ RLGAEVIDHL
510 520 530 540 550
LRLPLGYFDK RPVGELGSRV SELEKIRNFL TGQALTTLLD AAFSVIYVVV
560 570 580 590 600
MVIYSWLLTL IALAVLPIQV GLTLLGAPLF RRQFRQTAEE NAKTQSHLVE
610 620 630 640 650
VLTGIQTVKA QNVEMISRWK WQERYGRYIS RSFEKTISGT ALSQTSQVLQ
660 670 680 690 700
KISQLLVLWV GASMVLAGDL TLGQLIAFRI ISGYVTQPLL RLSTIWQSIQ
710 720 730 740 750
ELRVSFERLA DVIDTPQESN DLDKGKVPLP PLEGDVSFED LSFSFSKSTA
760 770 780 790 800
PVLKDISLNI KAGTFVGIVG QSGSGKSTLV KLLPRLYSPD QGRILIDGYD
810 820 830 840 850
IDKVELYSLR RQIGIVPQDP LLFSGSISEN IALTQPDADN DEIIMAAKLA
860 870 880 890 900
VAHDFIMTLP SGYSTPVGER GSSLSGGQRQ RIAIARTLLG NPKLLVMDEA
910 920 930 940 950
TSALDYETER KVCDNLVNAM HDCTVFFITH RLSTVRRADV IVVMHQGAIV
960 970
EMGTHEALME KRGRYYALYR QQESS
Length:975
Mass (Da):107,191
Last modified:February 20, 2007 - v1
Checksum:iBFC32AD3620AC3EC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000554 Genomic DNA. Translation: ABM76843.1.

Genome annotation databases

EnsemblBacteriaiABM76843; ABM76843; P9303_00861.
KEGGipmf:P9303_00861.
PATRICi22997520. VBIProMar17757_0092.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000554 Genomic DNA. Translation: ABM76843.1.

3D structure databases

ProteinModelPortaliA2C5T3.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABM76843; ABM76843; P9303_00861.
KEGGipmf:P9303_00861.
PATRICi22997520. VBIProMar17757_0092.

Phylogenomic databases

KOiK06147.
OMAiNAKTQSH.
OrthoDBiEOG6T7N3V.

Enzyme and pathway databases

BioCyciPMAR59922:GH54-139-MONOMER.

Family and domain databases

Gene3Di2.60.120.10. 1 hit.
3.40.50.300. 1 hit.
InterProiIPR003593. AAA+_ATPase.
IPR011527. ABC1_TM_dom.
IPR003439. ABC_transporter-like.
IPR017871. ABC_transporter_CS.
IPR010132. ATPase_T1SS_HlyB.
IPR018490. cNMP-bd-like.
IPR000595. cNMP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005074. Peptidase_C39.
IPR014710. RmlC-like_jellyroll.
[Graphical view]
PfamiPF00664. ABC_membrane. 1 hit.
PF00005. ABC_tran. 1 hit.
PF00027. cNMP_binding. 1 hit.
[Graphical view]
SMARTiSM00382. AAA. 1 hit.
[Graphical view]
SUPFAMiSSF51206. SSF51206. 1 hit.
SSF52540. SSF52540. 1 hit.
SSF90123. SSF90123. 1 hit.
TIGRFAMsiTIGR01846. type_I_sec_HlyB. 1 hit.
PROSITEiPS50929. ABC_TM1F. 1 hit.
PS00211. ABC_TRANSPORTER_1. 1 hit.
PS50893. ABC_TRANSPORTER_2. 1 hit.
PS50042. CNMP_BINDING_3. 1 hit.
PS50990. PEPTIDASE_C39. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: MIT 9303Imported.

Entry informationi

Entry nameiA2C5T3_PROM3
AccessioniPrimary (citable) accession number: A2C5T3
Entry historyi
Integrated into UniProtKB/TrEMBL: February 20, 2007
Last sequence update: February 20, 2007
Last modified: May 11, 2016
This is version 77 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.