A2C4X6 (RL17_PROM1) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
50S ribosomal protein L17

Gene names

Name:	rplQ
Synonyms:	rpl17
Ordered Locus Names:	NATL1_19801

Organism

Prochlorococcus marinus (strain NATL1A) [Complete proteome] [HAMAP]

Taxonomic identifier

167555 [NCBI]

Taxonomic lineage

Bacteria › Cyanobacteria › Prochlorophytes › Prochlorococcaceae › Prochlorococcus

Protein attributes

Sequence length	116 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Subunit structure	Part of the 50S ribosomal subunit. Contacts protein L32 By similarity.
Sequence similarities	Belongs to the ribosomal protein L17P family.

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: InterPro
Cellular component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 116	116	50S ribosomal protein L17 HAMAP MF_01368		PRO_1000055908

Sequences

	Sequence		Length	Mass (Da)
	A2C4X6 [UniParc]. Last modified February 20, 2007. Version 1. Checksum: 1E0E402D6946D35B	FASTA	116	13,348
	10 20 30 40 50 60 MRHQRRIPQL SLPADQRKAL LRGLTTQLIR EGRVTTTKAR AKALRNETER MITLAKDGSL 70 80 90 100 110 ASRRRAIGYV YDKQLVHALF EKAQERYGDR EGGYTRIVRT TPRRGDNSEM AIVELV

References

[1]

"Patterns and implications of gene gain and loss in the evolution of Prochlorococcus." Kettler G.C., Martiny A.C., Huang K., Zucker J., Coleman M.L., Rodrigue S., Chen F., Lapidus A., Ferriera S., Johnson J., Steglich C., Church G.M., Richardson P., Chisholm S.W. PLoS Genet. 3:2515-2528(2007) [PubMed: 18159947] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: NATL1A.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000553 Genomic DNA. Translation: ABM76536.1.
RefSeq	YP_001015800.1. NC_008819.1.
3D structure databases
ProteinModelPortal	A2C4X6.
SMR	A2C4X6. Positions 1-116.
ModBase	Search...
Protein-protein interaction databases
STRING	A2C4X6.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4779388.
GenomeReviews	Gene locus NATL1_19801 in contig CP000553_GR.
KEGG	pme:NATL1_19801.
PATRIC	23021617. VBIProMar31285_2021.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0203.
HOGENOM	HBG704211.
OMA	FSELGPR.
PhylomeDB	A2C4X6.
ProtClustDB	PRK05591.
Enzyme and pathway databases
BioCyc	PMAR167555:NATL1_19801-MONOMER.
Family and domain databases
HAMAP	MF_01368. Ribosomal_L17. [Tree]
InterPro	IPR000456. Ribosomal_L17. [Graphical view]
Gene3D	G3DSA:3.90.1030.10. Ribosomal_L17. 1 hit.
KO	K02879.
PANTHER	PTHR14413. Ribosomal_L17. 1 hit.
Pfam	PF01196. Ribosomal_L17. 1 hit. [Graphical view]
SUPFAM	SSF64263. Ribosomal_L17. 1 hit.
TIGRFAMs	TIGR00059. L17. 1 hit.
PROSITE	PS01167. RIBOSOMAL_L17. False negative. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RL17_PROM1

Accession

Primary (citable) accession number: A2C4X6

Entry history

Integrated into UniProtKB/Swiss-Prot:	January 15, 2008
Last sequence update:	February 20, 2007
Last modified:	December 14, 2011
This is version 29 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program