A2C4N6 (RPIA_PROM1) Reviewed, UniProtKB/Swiss-Prot
Last modified
December 14, 2011.
Version 32.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Ribose-5-phosphate isomerase A EC=5.3.1.6 Alternative name(s): Phosphoriboisomerase A Short name=PRI | ||||
| Gene names |
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| Organism | Prochlorococcus marinus (strain NATL1A) [Complete proteome] [HAMAP] | ||||
| Taxonomic identifier | 167555 [NCBI] | ||||
| Taxonomic lineage | Bacteria › Cyanobacteria › Prochlorophytes › Prochlorococcaceae › Prochlorococcus |
Protein attributes
| Sequence length | 236 AA. |
| Sequence status | Complete. |
| Protein existence | Inferred from homology |
General annotation (Comments)
| Catalytic activity | D-ribose 5-phosphate = D-ribulose 5-phosphate. HAMAP MF_00170 |
| Pathway | Carbohydrate degradation; pentose phosphate pathway; D-ribose 5-phosphate from D-ribulose 5-phosphate (non-oxidative stage): step 1/1. HAMAP MF_00170 |
| Sequence similarities | Belongs to the ribose 5-phosphate isomerase family. |
Ontologies
| Keywords | |
|---|---|
| Molecular function | Isomerase |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological process | pentose-phosphate shunt, non-oxidative branch Inferred from electronic annotation. Source: InterPro |
| Molecular function | ribose-5-phosphate isomerase activity Inferred from electronic annotation. Source: EC |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||
Molecule processing | |||||||
|---|---|---|---|---|---|---|---|
| Chain | 1 – 236 | 236 | Ribose-5-phosphate isomerase A HAMAP MF_00170 | PRO_1000194714 | |||
Sequences
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References
| [1] | "Patterns and implications of gene gain and loss in the evolution of Prochlorococcus." Kettler G.C., Martiny A.C., Huang K., Zucker J., Coleman M.L., Rodrigue S., Chen F., Lapidus A., Ferriera S., Johnson J., Steglich C., Church G.M., Richardson P., Chisholm S.W. PLoS Genet. 3:2515-2528(2007) [PubMed: 18159947] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: NATL1A. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | CP000553 Genomic DNA. Translation: ABM76446.1. |
| RefSeq | YP_001015710.1. NC_008819.1. |
3D structure databases | |
| ProteinModelPortal | A2C4N6. |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | A2C4N6. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| GeneID | 4779199. |
| GenomeReviews | Gene locus NATL1_18901 in contig CP000553_GR. |
| KEGG | pme:NATL1_18901. |
| PATRIC | 23021429. VBIProMar31285_1929. |
Organism-specific databases | |
| CMR | Search... |
Phylogenomic databases | |
| eggNOG | COG0120. |
| HOGENOM | HBG515603. |
| OMA | PTSFQSR. |
| PhylomeDB | A2C4N6. |
| ProtClustDB | PRK00702. |
Enzyme and pathway databases | |
| BioCyc | PMAR167555:NATL1_18901-MONOMER. |
Family and domain databases | |
| HAMAP | MF_00170. Rib_5P_isom_A. [Tree] |
| InterPro | IPR004788. Ribose5P_isomerase_typA. IPR020672. Ribose5P_isomerase_typA_subgr. IPR014036. Tscrpt_reg_HTH_DeoR. [Graphical view] |
| KO | K01807. |
| PANTHER | PTHR11934. RpiA. 1 hit. |
| Pfam | PF00455. DeoR. 1 hit. PF06026. Rib_5-P_isom_A. 1 hit. [Graphical view] |
| TIGRFAMs | TIGR00021. RpiA. 1 hit. |
| ProtoNet | Search... |
Entry information
| Entry name | RPIA_PROM1 | ||||||||
| Accession | Primary (citable) accession number: A2C4N6 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Prokaryotic Protein Annotation Program | ||||||||
Relevant documents
| PATHWAY comments Index of metabolic and biosynthesis pathways |
| SIMILARITY comments Index of protein domains and families |

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