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A2BWA5 (A2BWA5_PROM5) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 49. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=6.5.1.1 EMBL ABM72066.1
Gene names
Ordered Locus Names:P9515_08591 EMBL ABM72066.1
OrganismProchlorococcus marinus (strain MIT 9515) [Complete proteome] [HAMAP] EMBL ABM72066.1
Taxonomic identifier167542 [NCBI]
Taxonomic lineageBacteriaCyanobacteriaProchloralesProchlorococcaceaeProchlorococcus

Protein attributes

Sequence length545 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
A2BWA5 [UniParc].

Last modified February 20, 2007. Version 1.
Checksum: 8ED3D03554BD39E3

FASTA54563,999
        10         20         30         40         50         60 
MSLKKFSELY LDLDSCNSTN KKIEILNNYF SSNEDLENAW TIYLLTGKKN KRFISGSLLK 

        70         80         90        100        110        120 
TLFSEIYEYP LWLIDSCYLK VGDSSEVISL LLRNKIIGRN YKYQNISLNE LLNKFLPDLY 

       130        140        150        160        170        180 
ILKEEDKKLR LKEIWENIPK ENHLVINKIL TGTFRVGVSI GLITKSIAKL INLEEAIISH 

       190        200        210        220        230        240 
RLMGDFIPSP ETYQLLISKK INPSELNYKP YPFLLANTFD KKIIDKSIND FQFEWKWDGI 

       250        260        270        280        290        300 
RIQLIKRDGK ISIWSRGQEL VNKSFPELVE KIVFIKDDFV VDGELLVWNS IEDLPMNFSL 

       310        320        330        340        350        360 
LQKRLNRKEP SRKIQKSFPI TFIAYDLLEI DGEDQREFNL KNRRINLENN FYKWLNESEE 

       370        380        390        400        410        420 
DLSNIFKISK LIYPKNWKEA EMFKNNSRDN GTEGLVIKNK NSNYSPGRKK GLWWKYKVDP 

       430        440        450        460        470        480 
MQLDAVLIYA KGGTGIRAGL YTDYSFGLWK DGELIKFASA YSGLNNTEIK ELDKWIRQNT 

       490        500        510        520        530        540 
IERFGPVRSV KPKMVFEISF ENIQRSKRHK SGIAVRFPRI TKWRKDKFIQ DADTLENAQK 


LILSE 

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References

[1]"Patterns and implications of gene gain and loss in the evolution of Prochlorococcus."
Kettler G.C., Martiny A.C., Huang K., Zucker J., Coleman M.L., Rodrigue S., Chen F., Lapidus A., Ferriera S., Johnson J., Steglich C., Church G.M., Richardson P., Chisholm S.W.
PLoS Genet. 3:2515-2528(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: MIT 9515 EMBL ABM72066.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000552 Genomic DNA. Translation: ABM72066.1.
RefSeqYP_001011173.1. NC_008817.1.

3D structure databases

ProteinModelPortalA2BWA5.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING167542.P9515_08591.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABM72066; ABM72066; P9515_08591.
GeneID4719355.
KEGGpmc:P9515_08591.
PATRIC23015316. VBIProMar113831_0885.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1793.
HOGENOMHOG000036007.
KOK01971.
OMANRHKSGV.
OrthoDBEOG6Q8HXT.

Enzyme and pathway databases

BioCycPMAR167542:GI3N-883-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR04120. DNA_lig_bact. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA2BWA5_PROM5
AccessionPrimary (citable) accession number: A2BWA5
Entry history
Integrated into UniProtKB/TrEMBL: February 20, 2007
Last sequence update: February 20, 2007
Last modified: May 14, 2014
This is version 49 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)