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A2BVS2 (GLGA_PROM5) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 48. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Glycogen synthase

EC=2.4.1.21
Alternative name(s):
Starch [bacterial glycogen] synthase
Gene names
Name:glgA
Ordered Locus Names:P9515_06741
OrganismProchlorococcus marinus (strain MIT 9515) [Complete proteome] [HAMAP]
Taxonomic identifier167542 [NCBI]
Taxonomic lineageBacteriaCyanobacteriaProchloralesProchlorococcaceaeProchlorococcus

Protein attributes

Sequence length483 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Synthesizes alpha-1,4-glucan chains using ADP-glucose By similarity. HAMAP-Rule MF_00484

Catalytic activity

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1). HAMAP-Rule MF_00484

Pathway

Glycan biosynthesis; glycogen biosynthesis. HAMAP-Rule MF_00484

Sequence similarities

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.

Ontologies

Keywords
   Biological processGlycogen biosynthesis
   Molecular functionGlycosyltransferase
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processglycogen biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Molecular_functionstarch synthase activity

Inferred from electronic annotation. Source: UniProtKB-HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 483483Glycogen synthase HAMAP-Rule MF_00484
PRO_1000014376

Sites

Binding site151ADP-glucose By similarity

Sequences

Sequence LengthMass (Da)Tools
A2BVS2 [UniParc].

Last modified February 20, 2007. Version 1.
Checksum: 5C26C57C4BB790F4

FASTA48355,201
        10         20         30         40         50         60 
MRILLAAAEC APMIKVGGMG DVVGSLPPSL IKLGHDVRVI IPGYGKLWNL LEISSEPVFR 

        70         80         90        100        110        120 
ANTMGNEFSV YEAKHPIHNY IVYLVGHPTF DSGQIYGGED EDWRFTFFAS STAEFSWNYW 

       130        140        150        160        170        180 
KPQVLHCHDW HTGMIPVWMH QDPEISTVFT IHNLKYQGPW RWKLEKMTWC PWYMHGDHTM 

       190        200        210        220        230        240 
AAAMLYADRV NAVSPTYADE IKTHEYGESL DGLLNYISGK LRGILNGIDL NEWDPNIDKV 

       250        260        270        280        290        300 
LPAQFNIKNL ERRSENKIIL QKEMGLEVNS KKYLLGMVSR LVDQKGVDLV LQVSKRLLAY 

       310        320        330        340        350        360 
TDSQIAILGT GDKYLESGLW QLALDYPGRF SVFLTYDDSL SRLIYGGSDA FLMPSRFEPC 

       370        380        390        400        410        420 
GISQLLAMRY GSIPIVRRVG GLVDTVLPHD PENNCGTGFC FDRFEPIDFY TALVRSWEAF 

       430        440        450        460        470        480 
RHKDSWKLLQ IRAMSQEFSW QRSALEYELM YKDVCGIKEP SPDITEIEKF SYGQSADPSL 


KKI 

« Hide

References

[1]"Patterns and implications of gene gain and loss in the evolution of Prochlorococcus."
Kettler G.C., Martiny A.C., Huang K., Zucker J., Coleman M.L., Rodrigue S., Chen F., Lapidus A., Ferriera S., Johnson J., Steglich C., Church G.M., Richardson P., Chisholm S.W.
PLoS Genet. 3:2515-2528(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: MIT 9515.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000552 Genomic DNA. Translation: ABM71883.1.
RefSeqYP_001010990.1. NC_008817.1.

3D structure databases

ProteinModelPortalA2BVS2.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING167542.P9515_06741.

Protein family/group databases

CAZyGT5. Glycosyltransferase Family 5.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABM71883; ABM71883; P9515_06741.
GeneID4719552.
KEGGpmc:P9515_06741.
PATRIC23014930. VBIProMar113831_0693.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0297.
HOGENOMHOG000294940.
KOK00703.
OMAPYHDESQ.
OrthoDBEOG6JTC6Z.

Enzyme and pathway databases

BioCycPMAR167542:GI3N-697-MONOMER.
UniPathwayUPA00164.

Family and domain databases

HAMAPMF_00484. Glycogen_synth.
InterProIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsTIGR02095. glgA. 1 hit.
ProtoNetSearch...

Entry information

Entry nameGLGA_PROM5
AccessionPrimary (citable) accession number: A2BVS2
Entry history
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: February 20, 2007
Last modified: May 14, 2014
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PATHWAY comments

Index of metabolic and biosynthesis pathways