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A2BVP7

- GLGB_PROM5

UniProt

A2BVP7 - GLGB_PROM5

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Protein

1,4-alpha-glucan branching enzyme GlgB

Gene

glgB

Organism
Prochlorococcus marinus (strain MIT 9515)
Status
Reviewed - Annotation score: 3 out of 5- Protein inferred from homologyi

Functioni

Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position.UniRule annotation

Catalytic activityi

Transfers a segment of a (1->4)-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain.UniRule annotation

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei431 – 4311NucleophileUniRule annotation
Active sitei484 – 4841Proton donorUniRule annotation

GO - Molecular functioni

  1. 1,4-alpha-glucan branching enzyme activity Source: UniProtKB-HAMAP
  2. cation binding Source: InterPro
  3. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

GO - Biological processi

  1. glycogen biosynthetic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Carbohydrate metabolism, Glycogen biosynthesis, Glycogen metabolism

Enzyme and pathway databases

BioCyciPMAR167542:GI3N-672-MONOMER.
UniPathwayiUPA00164.

Protein family/group databases

CAZyiCBM48. Carbohydrate-Binding Module Family 48.
GH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Recommended name:
1,4-alpha-glucan branching enzyme GlgBUniRule annotation (EC:2.4.1.18UniRule annotation)
Alternative name(s):
1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferaseUniRule annotation
Alpha-(1->4)-glucan branching enzymeUniRule annotation
Glycogen branching enzymeUniRule annotation
Short name:
BEUniRule annotation
Gene namesi
Name:glgBUniRule annotation
Ordered Locus Names:P9515_06491
OrganismiProchlorococcus marinus (strain MIT 9515)
Taxonomic identifieri167542 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaProchloralesProchlorococcaceaeProchlorococcus
ProteomesiUP000001589: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 7547541,4-alpha-glucan branching enzyme GlgBPRO_1000044991Add
BLAST

Interactioni

Subunit structurei

Monomer.UniRule annotation

Protein-protein interaction databases

STRINGi167542.P9515_06491.

Structurei

3D structure databases

ProteinModelPortaliA2BVP7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.UniRule annotation

Phylogenomic databases

eggNOGiCOG0296.
HOGENOMiHOG000283037.
KOiK00700.
OMAiAKLLFMG.
OrthoDBiEOG6JX7GT.

Family and domain databases

Gene3Di2.60.40.10. 2 hits.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
HAMAPiMF_00685. GlgB.
InterProiIPR006048. A-amylase_b_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view]
PIRSFiPIRSF000463. GlgB. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 2 hits.
TIGRFAMsiTIGR01515. branching_enzym. 1 hit.

Sequencei

Sequence statusi: Complete.

A2BVP7-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MKETIQTDWI KSEAFNLENC CNDNPLNILG PHFFKGKWVT RVWMPEADEV
60 70 80 90 100
NITFKDKTYK TTTPNHKWMF EAILHEDPKN NYQINVLRGG VSHSQQDPWA
110 120 130 140 150
FKDEWMGEVD RHLFAEGNHH HIWKKMGAHI SEDINQKGVM FCIWAPNAKS
160 170 180 190 200
ISIIGDINSW DGRHHPMQKR LGGVWELFMP ILKEGDVYKY EIRTQQGHIY
210 220 230 240 250
EKADPYGFLH EVRPQNGSII SKLNNFNWED SSWITSRDSS SQINKPISVY
260 270 280 290 300
EMHLGSWMHD STDNKYIEKN GNPRHPVPAA DLKPGTRFLT YPELTEKLIP
310 320 330 340 350
YVKERGFTHI ELMPISEHPF DGSWGYQVTG WYAPTSRYGT PNEFKEFINK
360 370 380 390 400
CHAEGIGVIL DWVPGHFPKD KHGLAFFDGC HLYEHGDPRI GEHKEWGTLI
410 420 430 440 450
FNYSRNEVRN FLVANLIYWF EEFHIDGIRV DAVASMLYRD YLRPEGEWIP
460 470 480 490 500
NENGGNENLE AVKFLQQANH VLFQHFPGAL SIAEESTTWP MVTEPTNVGG
510 520 530 540 550
LGFNLKWNMG WMHDMLDYFE IDPWFRQFHQ NSVTFSITYN YTENFMLALS
560 570 580 590 600
HDEVVHGKSH LLHKMPGDDW KKFANTRALL TYMWTHPGKK TIFMGMEFGQ
610 620 630 640 650
RQEWNVWDDL QWELLEYEPH KGIRNLIDDL NKLYKNEPSL WKNDFDPYGF
660 670 680 690 700
QWIDCDDTSN SVISFMRREN ESNEWLVVIA NFTPNFHESY KIGVPLEGYY
710 720 730 740 750
KEIFNSDGSK YGGSNKGNMG GKDTLKYNIH NYENALEIAL PPLSVSIFKH

QLKK
Length:754
Mass (Da):88,200
Last modified:February 20, 2007 - v1
Checksum:i32ACD0F334692C38
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000552 Genomic DNA. Translation: ABM71858.1.
RefSeqiWP_011819963.1. NC_008817.1.
YP_001010965.1. NC_008817.1.

Genome annotation databases

EnsemblBacteriaiABM71858; ABM71858; P9515_06491.
GeneIDi4719658.
KEGGipmc:P9515_06491.
PATRICi23014880. VBIProMar113831_0668.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000552 Genomic DNA. Translation: ABM71858.1 .
RefSeqi WP_011819963.1. NC_008817.1.
YP_001010965.1. NC_008817.1.

3D structure databases

ProteinModelPortali A2BVP7.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 167542.P9515_06491.

Protein family/group databases

CAZyi CBM48. Carbohydrate-Binding Module Family 48.
GH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABM71858 ; ABM71858 ; P9515_06491 .
GeneIDi 4719658.
KEGGi pmc:P9515_06491.
PATRICi 23014880. VBIProMar113831_0668.

Phylogenomic databases

eggNOGi COG0296.
HOGENOMi HOG000283037.
KOi K00700.
OMAi AKLLFMG.
OrthoDBi EOG6JX7GT.

Enzyme and pathway databases

UniPathwayi UPA00164 .
BioCyci PMAR167542:GI3N-672-MONOMER.

Family and domain databases

Gene3Di 2.60.40.10. 2 hits.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
HAMAPi MF_00685. GlgB.
InterProi IPR006048. A-amylase_b_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view ]
PIRSFi PIRSF000463. GlgB. 1 hit.
SUPFAMi SSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 2 hits.
TIGRFAMsi TIGR01515. branching_enzym. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: MIT 9515.

Entry informationi

Entry nameiGLGB_PROM5
AccessioniPrimary (citable) accession number: A2BVP7
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: February 20, 2007
Last modified: October 1, 2014
This is version 61 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3