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Protein
Submitted name:

ATP-dependent DNA ligase

Gene

A9601_18891

Organism
Prochlorococcus marinus (strain AS9601)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciPMAR146891:GH90-1928-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligaseImported (EC:6.5.1.1Imported)
Gene namesi
Ordered Locus Names:A9601_18891Imported
OrganismiProchlorococcus marinus (strain AS9601)Imported
Taxonomic identifieri146891 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaProchloralesProchlorococcaceaeProchlorococcus
Proteomesi
  • UP000002590 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi146891.A9601_18891.

Structurei

3D structure databases

ProteinModelPortaliA2BTR1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini151 – 337187DNA_LIGASE_A3InterPro annotationAdd
BLAST
Domaini351 – 42979DNA_ligase_OB_2InterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiENOG4105WTD. Bacteria.
COG1793. LUCA.
HOGENOMiHOG000233254.
KOiK10747.
OMAiHDSANHE.
OrthoDBiPOG091H05UG.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A2BTR1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFKQEIIHQL ELHPSRLDKE KIILEAMEEG LDDFFEGIRM ALDPLVTFGV
60 70 80 90 100
KIVPEKETEK SKNFLWEDFR KLANKLIQRE LTGHAARDAI LKAMESATKE
110 120 130 140 150
EWNGFYRRVL IKDLRCGVSE KTINKIAKKF PKYAIPIFSC PLAHDSANHE
160 170 180 190 200
KKMIGKKQIE IKLDGVRVLT IIRQNKVEMF SRNGKQFHNF GHIISELENA
210 220 230 240 250
LKEDPAPYDL VLDGEVMSSN FQDLMKQVHR KDGKQTKDAV LHLFDLCPLE
260 270 280 290 300
NFQKGRWNTS QTKRSLLVKE WVAKHSMLLK HIQTLEWENV DLDTIEGQKR
310 320 330 340 350
FVELNKSAVE GGYEGVMIKD PDAMYECKRT HSWLKAKPFI EVTLKVISVE
360 370 380 390 400
EGTGRNKGRL GAILVEGEDD GYEYSLSCGS GFSDIQREEY WSKRNHLVGQ
410 420 430
LVEIRADAKT KSKDAVTFSL RFPRFKCFRG FKEGEKV
Length:437
Mass (Da):50,466
Last modified:February 20, 2007 - v1
Checksum:i59CD73D2D54E74BA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000551 Genomic DNA. Translation: ABM71172.1.
RefSeqiWP_011819290.1. NC_008816.1.

Genome annotation databases

EnsemblBacteriaiABM71172; ABM71172; A9601_18891.
KEGGipmb:A9601_18891.
PATRICi22985323. VBIProMar75723_1898.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000551 Genomic DNA. Translation: ABM71172.1.
RefSeqiWP_011819290.1. NC_008816.1.

3D structure databases

ProteinModelPortaliA2BTR1.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi146891.A9601_18891.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABM71172; ABM71172; A9601_18891.
KEGGipmb:A9601_18891.
PATRICi22985323. VBIProMar75723_1898.

Phylogenomic databases

eggNOGiENOG4105WTD. Bacteria.
COG1793. LUCA.
HOGENOMiHOG000233254.
KOiK10747.
OMAiHDSANHE.
OrthoDBiPOG091H05UG.

Enzyme and pathway databases

BioCyciPMAR146891:GH90-1928-MONOMER.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiA2BTR1_PROMS
AccessioniPrimary (citable) accession number: A2BTR1
Entry historyi
Integrated into UniProtKB/TrEMBL: February 20, 2007
Last sequence update: February 20, 2007
Last modified: September 7, 2016
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.