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A2BTR1 (A2BTR1_PROMS) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 43. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=6.5.1.1 EMBL ABM71172.1
Gene names
Ordered Locus Names:A9601_18891 EMBL ABM71172.1
OrganismProchlorococcus marinus (strain AS9601) [Complete proteome] [HAMAP] EMBL ABM71172.1
Taxonomic identifier146891 [NCBI]
Taxonomic lineageBacteriaCyanobacteriaProchloralesProchlorococcaceaeProchlorococcus

Protein attributes

Sequence length437 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL ABM71172.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA ligation involved in DNA repair

Inferred from electronic annotation. Source: InterPro

DNA recombination

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A2BTR1 [UniParc].

Last modified February 20, 2007. Version 1.
Checksum: 59CD73D2D54E74BA

FASTA43750,466
        10         20         30         40         50         60 
MFKQEIIHQL ELHPSRLDKE KIILEAMEEG LDDFFEGIRM ALDPLVTFGV KIVPEKETEK 

        70         80         90        100        110        120 
SKNFLWEDFR KLANKLIQRE LTGHAARDAI LKAMESATKE EWNGFYRRVL IKDLRCGVSE 

       130        140        150        160        170        180 
KTINKIAKKF PKYAIPIFSC PLAHDSANHE KKMIGKKQIE IKLDGVRVLT IIRQNKVEMF 

       190        200        210        220        230        240 
SRNGKQFHNF GHIISELENA LKEDPAPYDL VLDGEVMSSN FQDLMKQVHR KDGKQTKDAV 

       250        260        270        280        290        300 
LHLFDLCPLE NFQKGRWNTS QTKRSLLVKE WVAKHSMLLK HIQTLEWENV DLDTIEGQKR 

       310        320        330        340        350        360 
FVELNKSAVE GGYEGVMIKD PDAMYECKRT HSWLKAKPFI EVTLKVISVE EGTGRNKGRL 

       370        380        390        400        410        420 
GAILVEGEDD GYEYSLSCGS GFSDIQREEY WSKRNHLVGQ LVEIRADAKT KSKDAVTFSL 

       430 
RFPRFKCFRG FKEGEKV 

« Hide

References

[1]"Patterns and implications of gene gain and loss in the evolution of Prochlorococcus."
Kettler G.C., Martiny A.C., Huang K., Zucker J., Coleman M.L., Rodrigue S., Chen F., Lapidus A., Ferriera S., Johnson J., Steglich C., Church G.M., Richardson P., Chisholm S.W.
PLoS Genet. 3:2515-2528(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: AS9601 EMBL ABM71172.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000551 Genomic DNA. Translation: ABM71172.1.
RefSeqYP_001010279.1. NC_008816.1.

3D structure databases

ProteinModelPortalA2BTR1.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING146891.A9601_18891.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABM71172; ABM71172; A9601_18891.
GeneID4718627.
KEGGpmb:A9601_18891.
PATRIC22985323. VBIProMar75723_1898.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1793.
HOGENOMHOG000233254.
KOK01971.
OMAVICEVIV.
OrthoDBEOG6GFGFV.

Enzyme and pathway databases

BioCycPMAR146891:GH90-1928-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA2BTR1_PROMS
AccessionPrimary (citable) accession number: A2BTR1
Entry history
Integrated into UniProtKB/TrEMBL: February 20, 2007
Last sequence update: February 20, 2007
Last modified: June 11, 2014
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)