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A2BQ65

- GLGB_PROMS

UniProt

A2BQ65 - GLGB_PROMS

Protein

1,4-alpha-glucan branching enzyme GlgB

Gene

glgB

Organism
Prochlorococcus marinus (strain AS9601)
Status
Reviewed - Annotation score: 3 out of 5- Protein inferred from homologyi
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    • History
      Entry version 61 (01 Oct 2014)
      Sequence version 1 (20 Feb 2007)
      Previous versions | rss
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    Functioni

    Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position.UniRule annotation

    Catalytic activityi

    Transfers a segment of a (1->4)-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain.UniRule annotation

    Pathwayi

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei431 – 4311NucleophileUniRule annotation
    Active sitei484 – 4841Proton donorUniRule annotation

    GO - Molecular functioni

    1. 1,4-alpha-glucan branching enzyme activity Source: UniProtKB-HAMAP
    2. cation binding Source: InterPro
    3. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

    GO - Biological processi

    1. glycogen biosynthetic process Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Glycosyltransferase, Transferase

    Keywords - Biological processi

    Carbohydrate metabolism, Glycogen biosynthesis, Glycogen metabolism

    Enzyme and pathway databases

    BioCyciPMAR146891:GH90-658-MONOMER.
    UniPathwayiUPA00164.

    Protein family/group databases

    CAZyiCBM48. Carbohydrate-Binding Module Family 48.
    GH13. Glycoside Hydrolase Family 13.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    1,4-alpha-glucan branching enzyme GlgBUniRule annotation (EC:2.4.1.18UniRule annotation)
    Alternative name(s):
    1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferaseUniRule annotation
    Alpha-(1->4)-glucan branching enzymeUniRule annotation
    Glycogen branching enzymeUniRule annotation
    Short name:
    BEUniRule annotation
    Gene namesi
    Name:glgBUniRule annotation
    Ordered Locus Names:A9601_06401
    OrganismiProchlorococcus marinus (strain AS9601)
    Taxonomic identifieri146891 [NCBI]
    Taxonomic lineageiBacteriaCyanobacteriaProchloralesProchlorococcaceaeProchlorococcus
    ProteomesiUP000002590: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 7547541,4-alpha-glucan branching enzyme GlgBPRO_1000044992Add
    BLAST

    Interactioni

    Subunit structurei

    Monomer.UniRule annotation

    Protein-protein interaction databases

    STRINGi146891.A9601_06401.

    Structurei

    3D structure databases

    ProteinModelPortaliA2BQ65.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0296.
    HOGENOMiHOG000283037.
    KOiK00700.
    OMAiAKLLFMG.
    OrthoDBiEOG6JX7GT.

    Family and domain databases

    Gene3Di2.60.40.10. 2 hits.
    2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    HAMAPiMF_00685. GlgB.
    InterProiIPR006048. A-amylase_b_C.
    IPR006407. GlgB.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR004193. Glyco_hydro_13_N.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    IPR013783. Ig-like_fold.
    IPR014756. Ig_E-set.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    PF02806. Alpha-amylase_C. 1 hit.
    PF02922. CBM_48. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000463. GlgB. 1 hit.
    SUPFAMiSSF51445. SSF51445. 1 hit.
    SSF81296. SSF81296. 2 hits.
    TIGRFAMsiTIGR01515. branching_enzym. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    A2BQ65-1 [UniParc]FASTAAdd to Basket

    « Hide

    MIETIQADWI KSEAINLENC CNDNPLKILG PHFYEEQWVI RVWMPEADEV    50
    KINFKNNTYK AESINHKWLF EAILPENPNH NYEINILRGG VTHTQHDPWS 100
    YREEWMGEVD RHLFAEGNHH HIWEKMGAHL IEEKNQKGVM FCIWAPNAKS 150
    ISIIGDINSW DGRHHPMQKR LGGIWELFMP SMQEGDTYKY EIRTQQGHIY 200
    EKADPYGFLH EIRPQNGSIV SKLKNFNWND SSWISNRDSS SQINKPISVY 250
    EMHLGSWLHE STDNKYLENN GDPRDPVPAA DLKPGTRLLT YPELTKKLIP 300
    YVKERGFTHI ELMPISEHPF DGSWGYQVTG WYAPTSRFGT PNEFREFVNK 350
    CHEEGIGVIL DWVPGHFPKD KHGLAFFDGC HLYEHGDSRI GEHKEWGTLI 400
    FNYSRNEVRN FLVANLVYWF EEFHIDGIRV DAVASMLYRD YLRPDGEWIP 450
    NENGGNENIE AVKFLQQANH VLFQHFPGAL SIAEESTTWP MVTKPTDMGG 500
    LGFNLKWNMG WMHDMLDYFE IDPWFRQFHQ NSVTFSITYN YTENFMLALS 550
    HDEVVHGKSH LLHKMPGDDW KKYANTRALL TYMWTHPGKK TIFMGMEFGQ 600
    RQEWNVWDDL QWELLEFEPH KGIRNLIDDL NVLYKNEPAL WKNDFDPYGF 650
    QWIDCNDKSN SVISFMRREN DTNEWLVVVA NFTPNTHESY KVGVPMEGFY 700
    REIFNSDGSR YGGSNKGNLG GKETINYNIH DYQNALELAL PPLSVSIFKH 750
    QSKK 754
    Length:754
    Mass (Da):88,297
    Last modified:February 20, 2007 - v1
    Checksum:i2995D16898114DDD
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000551 Genomic DNA. Translation: ABM69926.1.
    RefSeqiYP_001009033.1. NC_008816.1.

    Genome annotation databases

    EnsemblBacteriaiABM69926; ABM69926; A9601_06401.
    GeneIDi4717341.
    KEGGipmb:A9601_06401.
    PATRICi22982760. VBIProMar75723_0640.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000551 Genomic DNA. Translation: ABM69926.1 .
    RefSeqi YP_001009033.1. NC_008816.1.

    3D structure databases

    ProteinModelPortali A2BQ65.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 146891.A9601_06401.

    Protein family/group databases

    CAZyi CBM48. Carbohydrate-Binding Module Family 48.
    GH13. Glycoside Hydrolase Family 13.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABM69926 ; ABM69926 ; A9601_06401 .
    GeneIDi 4717341.
    KEGGi pmb:A9601_06401.
    PATRICi 22982760. VBIProMar75723_0640.

    Phylogenomic databases

    eggNOGi COG0296.
    HOGENOMi HOG000283037.
    KOi K00700.
    OMAi AKLLFMG.
    OrthoDBi EOG6JX7GT.

    Enzyme and pathway databases

    UniPathwayi UPA00164 .
    BioCyci PMAR146891:GH90-658-MONOMER.

    Family and domain databases

    Gene3Di 2.60.40.10. 2 hits.
    2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    HAMAPi MF_00685. GlgB.
    InterProi IPR006048. A-amylase_b_C.
    IPR006407. GlgB.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR004193. Glyco_hydro_13_N.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    IPR013783. Ig-like_fold.
    IPR014756. Ig_E-set.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    PF02806. Alpha-amylase_C. 1 hit.
    PF02922. CBM_48. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000463. GlgB. 1 hit.
    SUPFAMi SSF51445. SSF51445. 1 hit.
    SSF81296. SSF81296. 2 hits.
    TIGRFAMsi TIGR01515. branching_enzym. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: AS9601.

    Entry informationi

    Entry nameiGLGB_PROMS
    AccessioniPrimary (citable) accession number: A2BQ65
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: January 15, 2008
    Last sequence update: February 20, 2007
    Last modified: October 1, 2014
    This is version 61 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    Documents

    1. Glycosyl hydrolases
      Classification of glycosyl hydrolase families and list of entries
    2. PATHWAY comments
      Index of metabolic and biosynthesis pathways
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3