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Protein

30S ribosomal protein S12

Gene

rps12

Organism
Hyperthermus butylicus (strain DSM 5456 / JCM 9403 / PLM1-5)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Keywords - Ligandi

RNA-binding, rRNA-binding

Enzyme and pathway databases

BioCyciHBUT415426:GC56-1578-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S12UniRule annotation
Gene namesi
Name:rps12UniRule annotation
Ordered Locus Names:Hbut_1578
OrganismiHyperthermus butylicus (strain DSM 5456 / JCM 9403 / PLM1-5)
Taxonomic identifieri415426 [NCBI]
Taxonomic lineageiArchaeaCrenarchaeotaThermoproteiDesulfurococcalesPyrodictiaceaeHyperthermus
Proteomesi
  • UP000002593 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002960471 – 14730S ribosomal protein S12Add BLAST147

Interactioni

Subunit structurei

Part of the 30S ribosomal subunit.UniRule annotation

Protein-protein interaction databases

STRINGi415426.Hbut_1578.

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein S12P family.UniRule annotation

Phylogenomic databases

eggNOGiarCOG04255. Archaea.
COG0048. LUCA.
HOGENOMiHOG000040064.
KOiK02950.
OMAiMPGKKSP.

Family and domain databases

CDDicd03367. Ribosomal_S23. 1 hit.
HAMAPiMF_00403_A. Ribosomal_S12_A. 1 hit.
InterProiIPR012340. NA-bd_OB-fold.
IPR006032. Ribosomal_S12/S23.
IPR022863. Ribosomal_S12_arc.
IPR005680. Ribosomal_S23_euk/arc.
[Graphical view]
PANTHERiPTHR11652. PTHR11652. 1 hit.
PfamiPF00164. Ribosom_S12_S23. 1 hit.
[Graphical view]
PIRSFiPIRSF002133. Ribosomal_S12/S23. 1 hit.
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR00982. uS12_E_A. 1 hit.
PROSITEiPS00055. RIBOSOMAL_S12. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A2BN38-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTGKKSPNGL FAARKLRRKR LKFRWSEREF KIRMLGLKKK YDPLEGAPMA
60 70 80 90 100
RGIVLEKVGV EARQPNSAVR KCVRVQLIKN GRIVTAFVPG DGGLLVVDEH
110 120 130 140
DEVLIEGIGG PRGRSMGDIP GVRYRVVTVN GVSLRAILEG RKQKPQR
Length:147
Mass (Da):16,426
Last modified:February 20, 2007 - v1
Checksum:i0137A4C320A653ED
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000493 Genomic DNA. Translation: ABM81399.1.
RefSeqiWP_011822717.1. NC_008818.1.

Genome annotation databases

EnsemblBacteriaiABM81399; ABM81399; Hbut_1578.
GeneIDi4781860.
KEGGihbu:Hbut_1578.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000493 Genomic DNA. Translation: ABM81399.1.
RefSeqiWP_011822717.1. NC_008818.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi415426.Hbut_1578.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABM81399; ABM81399; Hbut_1578.
GeneIDi4781860.
KEGGihbu:Hbut_1578.

Phylogenomic databases

eggNOGiarCOG04255. Archaea.
COG0048. LUCA.
HOGENOMiHOG000040064.
KOiK02950.
OMAiMPGKKSP.

Enzyme and pathway databases

BioCyciHBUT415426:GC56-1578-MONOMER.

Family and domain databases

CDDicd03367. Ribosomal_S23. 1 hit.
HAMAPiMF_00403_A. Ribosomal_S12_A. 1 hit.
InterProiIPR012340. NA-bd_OB-fold.
IPR006032. Ribosomal_S12/S23.
IPR022863. Ribosomal_S12_arc.
IPR005680. Ribosomal_S23_euk/arc.
[Graphical view]
PANTHERiPTHR11652. PTHR11652. 1 hit.
PfamiPF00164. Ribosom_S12_S23. 1 hit.
[Graphical view]
PIRSFiPIRSF002133. Ribosomal_S12/S23. 1 hit.
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR00982. uS12_E_A. 1 hit.
PROSITEiPS00055. RIBOSOMAL_S12. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiRS12_HYPBU
AccessioniPrimary (citable) accession number: A2BN38
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 24, 2007
Last sequence update: February 20, 2007
Last modified: October 5, 2016
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.