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Protein

30S ribosomal protein S4e

Gene

rps4e

Organism
Hyperthermus butylicus (strain DSM 5456 / JCM 9403 / PLM1-5)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S4eUniRule annotation
Gene namesi
Name:rps4eUniRule annotation
Ordered Locus Names:Hbut_1312
OrganismiHyperthermus butylicus (strain DSM 5456 / JCM 9403 / PLM1-5)
Taxonomic identifieri415426 [NCBI]
Taxonomic lineageiArchaeaCrenarchaeotaThermoproteiDesulfurococcalesPyrodictiaceaeHyperthermus
Proteomesi
  • UP000002593 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_10000813341 – 25530S ribosomal protein S4eAdd BLAST255

Interactioni

Protein-protein interaction databases

STRINGi415426.Hbut_1312

Structurei

3D structure databases

SMRiA2BMD1
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini43 – 115S4 RNA-bindingUniRule annotationAdd BLAST73

Sequence similaritiesi

Belongs to the eukaryotic ribosomal protein eS4 family.UniRule annotation

Phylogenomic databases

eggNOGiarCOG04093 Archaea
COG1471 LUCA
HOGENOMiHOG000231324
KOiK02987
OMAiRKDYKFP
OrthoDBiPOG093Z0C23

Family and domain databases

CDDicd00165 S4, 1 hit
Gene3Di2.30.30.30, 1 hit
2.40.50.740, 1 hit
HAMAPiMF_00485 Ribosomal_S4e, 1 hit
InterProiView protein in InterPro
IPR014722 Rib_L2_dom2
IPR000876 Ribosomal_S4e
IPR013845 Ribosomal_S4e_central_region
IPR038237 Ribosomal_S4e_central_sf
IPR013843 Ribosomal_S4e_N
IPR002942 S4_RNA-bd
PANTHERiPTHR11581 PTHR11581, 1 hit
PfamiView protein in Pfam
PF00900 Ribosomal_S4e, 1 hit
PF08071 RS4NT, 1 hit
PF01479 S4, 1 hit
PIRSFiPIRSF002116 Ribosomal_S4, 1 hit
ProDomiView protein in ProDom or Entries sharing at least one domain
PD002667 Ribosomal_S4e_central, 1 hit
SMARTiView protein in SMART
SM00363 S4, 1 hit
PROSITEiView protein in PROSITE
PS50889 S4, 1 hit

Sequencei

Sequence statusi: Complete.

A2BMD1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MARMGGRRHL KTLAAPKFWP VRQRAGIFTV KPSPGPHPIE RSIPLLILVR
60 70 80 90 100
DVLGYAKTAR EARKLIAEGH FKIDGRVRRN YKYPVGFMDV IEIVDTGEFY
110 120 130 140 150
RVLPYPTRFF TLHPISKEEA QFKLGRIEDK STVKGGHIQL HLHDGRNVLI
160 170 180 190 200
RVSDPTNPVE AKPYKTLGTV KISIPEQQLL GYAPLEVGSL VIIFGGRNVG
210 220 230 240 250
RVGRIVSIQP GMRRRGIVTI EDARGEKIQT SLEYVFVIAP PNEEPWISLP

EGAWK
Length:255
Mass (Da):28,756
Last modified:February 20, 2007 - v1
Checksum:i22C071317C428AEA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000493 Genomic DNA Translation: ABM81142.1
RefSeqiWP_011822460.1, NC_008818.1

Genome annotation databases

EnsemblBacteriaiABM81142; ABM81142; Hbut_1312
GeneIDi4782923
KEGGihbu:Hbut_1312

Similar proteinsi

Entry informationi

Entry nameiRS4E_HYPBU
AccessioniPrimary (citable) accession number: A2BMD1
Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 20, 2008
Last sequence update: February 20, 2007
Last modified: March 28, 2018
This is version 67 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

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