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Protein

30S ribosomal protein S11

Gene

rps11

Organism
Hyperthermus butylicus (strain DSM 5456 / JCM 9403 / PLM1-5)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Located on the platform of the 30S subunit.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Keywords - Ligandi

RNA-binding, rRNA-binding

Enzyme and pathway databases

BioCyciHBUT415426:GC56-529-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S11UniRule annotation
Gene namesi
Name:rps11UniRule annotation
Ordered Locus Names:Hbut_0529
OrganismiHyperthermus butylicus (strain DSM 5456 / JCM 9403 / PLM1-5)
Taxonomic identifieri415426 [NCBI]
Taxonomic lineageiArchaeaCrenarchaeotaThermoproteiDesulfurococcalesPyrodictiaceaeHyperthermus
Proteomesi
  • UP000002593 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 13313330S ribosomal protein S11PRO_0000294894Add
BLAST

Proteomic databases

PRIDEiA2BK78.

Interactioni

Subunit structurei

Part of the 30S ribosomal subunit.UniRule annotation

Protein-protein interaction databases

STRINGi415426.Hbut_0529.

Structurei

3D structure databases

ProteinModelPortaliA2BK78.
SMRiA2BK78. Positions 10-129.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein S11P family.UniRule annotation

Phylogenomic databases

eggNOGiarCOG04240. Archaea.
COG0100. LUCA.
HOGENOMiHOG000111598.
KOiK02948.
OMAiKWGVAHI.

Family and domain databases

Gene3Di3.30.420.80. 1 hit.
HAMAPiMF_01310. Ribosomal_S11. 1 hit.
InterProiIPR001971. Ribosomal_S11.
IPR019961. Ribosomal_S11_archaeal.
IPR018102. Ribosomal_S11_CS.
[Graphical view]
PANTHERiPTHR11759. PTHR11759. 1 hit.
PfamiPF00411. Ribosomal_S11. 1 hit.
[Graphical view]
PIRSFiPIRSF002131. Ribosomal_S11. 1 hit.
TIGRFAMsiTIGR03628. arch_S11P. 1 hit.
PROSITEiPS00054. RIBOSOMAL_S11. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A2BK78-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVFSAREIKW GVAHIYSSYN NTIIHITDLT GAETVARTSG GMVVKADREK
60 70 80 90 100
PSPYAAMLAA SRAAQQAMDR GIMALHIKVR APGGHGPKTP GPGAQAAIRA
110 120 130
LARAGFIIGR IEDVTPLPHD TTRRPGGRRG RRV
Length:133
Mass (Da):14,205
Last modified:February 20, 2007 - v1
Checksum:i4520539F36047CCB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000493 Genomic DNA. Translation: ABM80389.1.
RefSeqiWP_011821707.1. NC_008818.1.

Genome annotation databases

EnsemblBacteriaiABM80389; ABM80389; Hbut_0529.
GeneIDi4782423.
KEGGihbu:Hbut_0529.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000493 Genomic DNA. Translation: ABM80389.1.
RefSeqiWP_011821707.1. NC_008818.1.

3D structure databases

ProteinModelPortaliA2BK78.
SMRiA2BK78. Positions 10-129.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi415426.Hbut_0529.

Proteomic databases

PRIDEiA2BK78.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABM80389; ABM80389; Hbut_0529.
GeneIDi4782423.
KEGGihbu:Hbut_0529.

Phylogenomic databases

eggNOGiarCOG04240. Archaea.
COG0100. LUCA.
HOGENOMiHOG000111598.
KOiK02948.
OMAiKWGVAHI.

Enzyme and pathway databases

BioCyciHBUT415426:GC56-529-MONOMER.

Family and domain databases

Gene3Di3.30.420.80. 1 hit.
HAMAPiMF_01310. Ribosomal_S11. 1 hit.
InterProiIPR001971. Ribosomal_S11.
IPR019961. Ribosomal_S11_archaeal.
IPR018102. Ribosomal_S11_CS.
[Graphical view]
PANTHERiPTHR11759. PTHR11759. 1 hit.
PfamiPF00411. Ribosomal_S11. 1 hit.
[Graphical view]
PIRSFiPIRSF002131. Ribosomal_S11. 1 hit.
TIGRFAMsiTIGR03628. arch_S11P. 1 hit.
PROSITEiPS00054. RIBOSOMAL_S11. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiRS11_HYPBU
AccessioniPrimary (citable) accession number: A2BK78
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 10, 2007
Last sequence update: February 20, 2007
Last modified: December 9, 2015
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.