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Protein
Submitted name:

Caprin-1

Gene

Caprin1

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Caprin-1Imported
Gene namesi
Name:Caprin1Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 2

Organism-specific databases

MGIiMGI:1858234. Caprin1.

PTM / Processingi

Proteomic databases

PaxDbiA2BH47.
PeptideAtlasiA2BH47.

Expressioni

Gene expression databases

BgeeiA2BH47.
ExpressionAtlasiA2BH47. baseline and differential.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000028607.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini33 – 8452Caprin-1_CInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiENOG410IEA8. Eukaryota.
ENOG4110M5Q. LUCA.
GeneTreeiENSGT00760000119052.

Family and domain databases

InterProiIPR028816. Caprin.
IPR022070. Caprin-1_C.
[Graphical view]
PANTHERiPTHR22922. PTHR22922. 1 hit.
PfamiPF12287. Caprin-1_C. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

A2BH47-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
QQSQYQATYN QSFSSQPHQV EQTELQQDQL QTGGYDGYRP SFSNTPNSGY
60 70 80 90
SQSQFTAPRD YSGYQRDGYQ QNFKRGSGQS GPRGAPRGNI LWW
Length:93
Mass (Da):10,608
Last modified:February 20, 2007 - v1
Checksum:i474E94F561A73B66
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX537331 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSMUST00000145606; ENSMUSP00000119327; ENSMUSG00000027184.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX537331 Genomic DNA. No translation available.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000028607.

Proteomic databases

PaxDbiA2BH47.
PeptideAtlasiA2BH47.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000145606; ENSMUSP00000119327; ENSMUSG00000027184.

Organism-specific databases

MGIiMGI:1858234. Caprin1.

Phylogenomic databases

eggNOGiENOG410IEA8. Eukaryota.
ENOG4110M5Q. LUCA.
GeneTreeiENSGT00760000119052.

Miscellaneous databases

ChiTaRSiCaprin1. mouse.
SOURCEiSearch...

Gene expression databases

BgeeiA2BH47.
ExpressionAtlasiA2BH47. baseline and differential.

Family and domain databases

InterProiIPR028816. Caprin.
IPR022070. Caprin-1_C.
[Graphical view]
PANTHERiPTHR22922. PTHR22922. 1 hit.
PfamiPF12287. Caprin-1_C. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C57BL/6JImported.
  2. Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
  3. Ensembl
    Submitted (FEB-2012) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: C57BL/6JImported.

Entry informationi

Entry nameiA2BH47_MOUSE
AccessioniPrimary (citable) accession number: A2BH47
Entry historyi
Integrated into UniProtKB/TrEMBL: February 20, 2007
Last sequence update: February 20, 2007
Last modified: July 6, 2016
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.