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Protein
Submitted name:

Caprin-1

Gene

Caprin1

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Caprin-1Imported
Gene namesi
Name:Caprin1Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 2

Organism-specific databases

MGIiMGI:1858234. Caprin1.

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Proteomic databases

MaxQBiA2BH47.
PaxDbiA2BH47.
PeptideAtlasiA2BH47.

Expressioni

Gene expression databases

BgeeiENSMUSG00000027184.
ExpressionAtlasiA2BH47. baseline and differential.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000028607.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini33 – 84Caprin-1_CInterPro annotationAdd BLAST52

Phylogenomic databases

eggNOGiENOG410IEA8. Eukaryota.
ENOG4110M5Q. LUCA.
GeneTreeiENSGT00760000119052.

Family and domain databases

InterProiView protein in InterPro
IPR028816. Caprin.
IPR022070. Caprin-1_C.
PANTHERiPTHR22922. PTHR22922. 1 hit.
PfamiView protein in Pfam
PF12287. Caprin-1_C. 1 hit.

Sequencei

Sequence statusi: Fragment.

A2BH47-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
QQSQYQATYN QSFSSQPHQV EQTELQQDQL QTGGYDGYRP SFSNTPNSGY
60 70 80 90
SQSQFTAPRD YSGYQRDGYQ QNFKRGSGQS GPRGAPRGNI LWW
Length:93
Mass (Da):10,608
Last modified:February 20, 2007 - v1
Checksum:i474E94F561A73B66
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX537331 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSMUST00000145606; ENSMUSP00000119327; ENSMUSG00000027184.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX537331 Genomic DNA. No translation available.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000028607.

Proteomic databases

MaxQBiA2BH47.
PaxDbiA2BH47.
PeptideAtlasiA2BH47.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000145606; ENSMUSP00000119327; ENSMUSG00000027184.

Organism-specific databases

MGIiMGI:1858234. Caprin1.

Phylogenomic databases

eggNOGiENOG410IEA8. Eukaryota.
ENOG4110M5Q. LUCA.
GeneTreeiENSGT00760000119052.

Miscellaneous databases

ChiTaRSiCaprin1. mouse.
SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000027184.
ExpressionAtlasiA2BH47. baseline and differential.

Family and domain databases

InterProiView protein in InterPro
IPR028816. Caprin.
IPR022070. Caprin-1_C.
PANTHERiPTHR22922. PTHR22922. 1 hit.
PfamiView protein in Pfam
PF12287. Caprin-1_C. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiA2BH47_MOUSE
AccessioniPrimary (citable) accession number: A2BH47
Entry historyiIntegrated into UniProtKB/TrEMBL: February 20, 2007
Last sequence update: February 20, 2007
Last modified: May 10, 2017
This is version 62 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.