A2BFN6 (A2BFN6_DANRE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Uncharacterized protein Ensembl ENSDARP00000023322

Gene names

Name:

hmbsa Ensembl ENSDARP00000023322 ZFIN ZDB-GENE-040426-1375

Organism

Danio rerio (Zebrafish) (Brachydanio rerio) [Reference proteome] Ensembl ENSDARP00000023322

Taxonomic identifier

7955 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Actinopterygii › Actinopteri › Neopterygii › Teleostei › Elopocephala › Clupeocephala › Otocephala › Ostariophysi › Otophysi › Cypriniphysi › Cypriniformes › Cyprinoidea › Cyprinidae › Danio

Protein attributes

Sequence length	358 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

General annotation (Comments)

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSDARP00000023322

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	peptidyl-pyrromethane cofactor linkage Inferred from electronic annotation. Source: InterPro tetrapyrrole biosynthetic process Inferred from electronic annotation. Source: InterPro
Molecular_function	hydroxymethylbilane synthase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A2BFN6 [UniParc]. Last modified February 20, 2007. Version 1. Checksum: 96E783508894EE80	FASTA	358	39,000
	10 20 30 40 50 60 MEGPFKYIRE GNGKASRVIR MGTRKSQLAR IQTDSVAGTL KQLYPDVHLE IVAMSTIGDK 70 80 90 100 110 120 ILDTALSKIG EKSLFTKELE NALERNEVDI VVHSLKDLPT SLPPGFTIGA ILERENPHDA 130 140 150 160 170 180 VVLHPKNAGL TLDSLPEKSV IGTSSLRRAA QLKKRFPQLE FENIRGNLNT RLKKLDEKDD 190 200 210 220 230 240 YAAIILAAAG LKRMGWESRI SQVLGPEDCM YAVGQGALAV EVRAQDKDIL EMVSVLHHPD 250 260 270 280 290 300 TVLRCISERA FLKQLEGGCS VPVAVHTEVK GSMLYLTGAV YSLDGADCLK DTMQTCVELD 310 320 330 340 350 NKVNESTQRS ANVGVTACNI SSSALEAAEK LGLDLANVLL NKGAKDILTT ARKLNDAR

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"The genomic sequence of Danio rerio." The Danio rerio Sequencing Project at the Sanger Institute Submitted (JUL-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Tuebingen Ensembl ENSDARP00000023322.
[2]	Ensembl Submitted (FEB-2012) to UniProtKB Cited for: IDENTIFICATION. Strain: Tuebingen Ensembl ENSDARP00000023322.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BX294169 Genomic DNA. No translation available.
IPI	IPI00487717.
3D structure databases
ProteinModelPortal	A2BFN6.
ModBase	Search...
Protein-protein interaction databases
STRING	7955.ENSDARP00000023322.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
Ensembl	ENSDART00000013431; ENSDARP00000023322; ENSDARG00000008840.
Organism-specific databases
ZFIN	ZDB-GENE-040426-1375. hmbsa.
Phylogenomic databases
eggNOG	COG0181.
GeneTree	ENSGT00390000009083.
HOGENOM	HOG000228587.
HOVERGEN	HBG000967.
InParanoid	A2BFN6.
OMA	NGSCDTP.
Gene expression databases
ArrayExpress	A2BFN6.
Family and domain databases
Gene3D	3.30.160.40. 1 hit.
HAMAP	MF_00260. Porphobil_deam.
InterPro	IPR000860. 4pyrrol_synth_OHMeBilane_synth. IPR022419. Porphobilin_deaminase_cofac_BS. IPR022417. Porphobilin_deaminase_N. IPR022418. Porphobilinogen_deaminase_C. [Graphical view]
PANTHER	PTHR11557. PTHR11557. 1 hit.
Pfam	PF01379. Porphobil_deam. 1 hit. PF03900. Porphobil_deamC. 1 hit. [Graphical view]
PIRSF	PIRSF001438. 4pyrrol_synth_OHMeBilane_synth. 1 hit.
PRINTS	PR00151. PORPHBDMNASE.
SUPFAM	SSF54782. Porphobil_deam. 1 hit.
TIGRFAMs	TIGR00212. hemC. 1 hit.
PROSITE	PS00533. PORPHOBILINOGEN_DEAM. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A2BFN6_DANRE

Accession

Primary (citable) accession number: A2BFN6

Entry history

Integrated into UniProtKB/TrEMBL:	February 20, 2007
Last sequence update:	February 20, 2007
Last modified:	April 3, 2013
This is version 47 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)