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Protein

One cut domain family member

Gene

onecutl

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi365 – 424HomeoboxPROSITE-ProRule annotationAdd BLAST60

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotation
Biological processTranscription, Transcription regulationUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
One cut domain family memberUniRule annotation
Gene namesi
Name:onecutlImported
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio
Proteomesi
  • UP000000437 Componenti: Chromosome 16

Organism-specific databases

ZFINiZDB-GENE-020531-1 onecutl

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotation

Expressioni

Gene expression databases

BgeeiENSDARG00000040253

Interactioni

Protein-protein interaction databases

STRINGi7955.ENSDARP00000124289

Structurei

3D structure databases

ProteinModelPortaliA2BF65
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini262 – 348CUTInterPro annotationAdd BLAST87
Domaini363 – 423HomeoboxInterPro annotationAdd BLAST61

Sequence similaritiesi

Belongs to the CUT homeobox family.UniRule annotation

Keywords - Domaini

HomeoboxPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiENOG410ITTB Eukaryota
ENOG4111F64 LUCA
GeneTreeiENSGT00530000063019
HOGENOMiHOG000232114
HOVERGENiHBG005981
OMAiRENHRPT
OrthoDBiEOG091G0E7H
PhylomeDBiA2BF65
TreeFamiTF318206

Family and domain databases

CDDicd00086 homeodomain, 1 hit
InterProiView protein in InterPro
IPR003350 CUT_dom
IPR009057 Homeobox-like_sf
IPR001356 Homeobox_dom
IPR010982 Lambda_DNA-bd_dom_sf
PfamiView protein in Pfam
PF02376 CUT, 1 hit
PF00046 Homeobox, 1 hit
SMARTiView protein in SMART
SM01109 CUT, 1 hit
SM00389 HOX, 1 hit
SUPFAMiSSF46689 SSF46689, 1 hit
SSF47413 SSF47413, 1 hit
PROSITEiView protein in PROSITE
PS51042 CUT, 1 hit
PS50071 HOMEOBOX_2, 1 hit

Sequencei

Sequence statusi: Complete.

A2BF65-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDGNMGEMSV HSHVELAHSQ ESRAMLHSRD LTAAFPRPSL GGPVMGLESD
60 70 80 90 100
HQSPTYDHMA TLGYSRDAPT TCGSTYTTLT PLQPFDDKFH HHHHHPCLPV
110 120 130 140 150
SNVIGSFTLM REDRSLGGNY YTSYGKDFGL GQGLSPPLGS AGLDTAMHGY
160 170 180 190 200
GTLGSQNGHS SQMLPGGHEV HMGSNGSNIC RTVPDFVREM SPPSLGAEHG
210 220 230 240 250
VSHQLNKMDA HQHTPTYHHH LYNQSYQHHL PSQQASKLGE LPSSSPSSSG
260 270 280 290 300
SSLGREGMLA GSQNGSGGEE INTKDVAQRI ITELKRYSIP QAIFAERVLC
310 320 330 340 350
RSQGTLSDLL RNPKPWGKLK SGRETFKRMS RWLQEPEFQR MASLRLEACK
360 370 380 390 400
RKEQEQSKVE RNQGPKRTRL VFTDLQRRTL MAIFRENHRP TKDLQITISQ
410 420 430 440 450
QLGLELSTVS NFFMNARRRN LNRWAEEGRP SSTGSSGSST ASPAVTCSTA
Length:450
Mass (Da):49,679
Last modified:February 20, 2007 - v1
Checksum:iFD2F6A6E5D33847A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX248517 Genomic DNA No translation available.
RefSeqiXP_005158098.1, XM_005158041.3
UniGeneiDr.108249
Dr.159955

Genome annotation databases

EnsembliENSDART00000150028; ENSDARP00000124289; ENSDARG00000040253
ENSDART00000175376; ENSDARP00000143806; ENSDARG00000040253
GeneIDi246225

Similar proteinsi

Entry informationi

Entry nameiA2BF65_DANRE
AccessioniPrimary (citable) accession number: A2BF65
Entry historyiIntegrated into UniProtKB/TrEMBL: February 20, 2007
Last sequence update: February 20, 2007
Last modified: April 25, 2018
This is version 92 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
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Main funding by: National Institutes of Health