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Protein

Transmembrane protein FAM155B

Gene

Fam155b

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Names & Taxonomyi

Protein namesi
Recommended name:
Transmembrane protein FAM155B
Alternative name(s):
Protein TED
Transmembrane protein 28
Gene namesi
Name:Fam155b
Synonyms:Tmem28
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome X

Organism-specific databases

MGIiMGI:3648377. Tmem28.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei47 – 6721HelicalSequence analysisAdd
BLAST
Transmembranei432 – 45221HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 471471Transmembrane protein FAM155BPRO_0000339376Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Glycosylationi120 – 1201N-linked (GlcNAc...)Sequence analysis

Keywords - PTMi

Glycoprotein

Proteomic databases

PaxDbiA2BDP1.
PRIDEiA2BDP1.

PTM databases

PhosphoSiteiA2BDP1.

Expressioni

Gene expression databases

BgeeiENSMUSG00000071719.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000094090.

Family & Domainsi

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi19 – 246Poly-Cys
Compositional biasi80 – 179100Pro-richAdd
BLAST
Compositional biasi381 – 40424His-richAdd
BLAST

Sequence similaritiesi

Belongs to the FAM155 family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG410IKAJ. Eukaryota.
ENOG410ZYWZ. LUCA.
GeneTreeiENSGT00390000006985.
HOGENOMiHOG000090197.
HOVERGENiHBG107868.
InParanoidiA2BDP1.
OMAiSRPVCGG.
OrthoDBiEOG091G07ZK.
TreeFamiTF331752.

Family and domain databases

InterProiIPR029604. FAM155.
[Graphical view]
PANTHERiPTHR15819:SF8. PTHR15819:SF8. 1 hit.

Sequencei

Sequence statusi: Complete.

A2BDP1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFRGAWMWPG KDAAALTICC CCCCWAPRQS DKPCADSERA QRWRLSLASL
60 70 80 90 100
LFFTVLLADH LWLCAGARPR ARELSSAMRP PWGAGRERQP VPPRAVLPPP
110 120 130 140 150
PPSPGEPSAS SGTCGPRYSN LTKAAPAAGS GPVCNGVPEP TGLDAACTKL
160 170 180 190 200
ESLQRLFEPT TPAPPLRPPD SPSRAPEFPS AKKNLLKGHF RNFTLSFCDT
210 220 230 240 250
YTVWDLLLGM DRPDSLDCSL DTLLGDLLAV VASPGSGTWE ACSNCIEAYQ
260 270 280 290 300
RLDRHAQEKY DEFDLVLHKY LQAEEYSIRS CTKGCKAVYK AWLCSEYFSV
310 320 330 340 350
TQQECQNWVP CKQYCLEVQT RCPFILPDNE EMVYGGLPGF ICTGLMDTSP
360 370 380 390 400
KRPETKCCDV QWVSCESEKK KFKDSEPPKT HHQQFHHSYF HHYHHQYHHY
410 420 430 440 450
HPRHEPPSRV SNKPSLLPVS GGSRLSPSRI RLCVLVLILL HTVVSFSSSQ
460 470
SGGGLGLETL PALEEGLTQE E
Length:471
Mass (Da):52,389
Last modified:February 20, 2007 - v1
Checksum:i284FC83F22298219
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX000691 Genomic DNA. Translation: CAM13493.1.
CCDSiCCDS41072.1.
RefSeqiNP_001074752.1. NM_001081283.1.
UniGeneiMm.388976.

Genome annotation databases

EnsembliENSMUST00000096363; ENSMUSP00000094090; ENSMUSG00000071719.
GeneIDi620592.
KEGGimmu:620592.
UCSCiuc009tvn.1. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX000691 Genomic DNA. Translation: CAM13493.1.
CCDSiCCDS41072.1.
RefSeqiNP_001074752.1. NM_001081283.1.
UniGeneiMm.388976.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000094090.

PTM databases

PhosphoSiteiA2BDP1.

Proteomic databases

PaxDbiA2BDP1.
PRIDEiA2BDP1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000096363; ENSMUSP00000094090; ENSMUSG00000071719.
GeneIDi620592.
KEGGimmu:620592.
UCSCiuc009tvn.1. mouse.

Organism-specific databases

CTDi620592.
MGIiMGI:3648377. Tmem28.

Phylogenomic databases

eggNOGiENOG410IKAJ. Eukaryota.
ENOG410ZYWZ. LUCA.
GeneTreeiENSGT00390000006985.
HOGENOMiHOG000090197.
HOVERGENiHBG107868.
InParanoidiA2BDP1.
OMAiSRPVCGG.
OrthoDBiEOG091G07ZK.
TreeFamiTF331752.

Miscellaneous databases

PROiA2BDP1.
SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000071719.

Family and domain databases

InterProiIPR029604. FAM155.
[Graphical view]
PANTHERiPTHR15819:SF8. PTHR15819:SF8. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiF155B_MOUSE
AccessioniPrimary (citable) accession number: A2BDP1
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 10, 2008
Last sequence update: February 20, 2007
Last modified: September 7, 2016
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.