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Protein
Submitted name:

Internexin neuronal intermediate filament protein, alpha a

Gene

inaa

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
Internexin neuronal intermediate filament protein, alpha aImported
Gene namesi
Name:inaaImported
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio
Proteomesi
  • UP000000437 Componenti: Chromosome 13

Organism-specific databases

ZFINiZDB-GENE-060531-65 inaa

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Intermediate filamentUniRule annotationSAAS annotation

PTM / Processingi

Proteomic databases

PaxDbiA2ATX5
PeptideAtlasiA2ATX5

Expressioni

Gene expression databases

BgeeiENSDARG00000011862

Interactioni

Protein-protein interaction databases

STRINGi7955.ENSDARP00000012437

Structurei

3D structure databases

ProteinModelPortaliA2ATX5
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini8 – 92Filament_headInterPro annotationAdd BLAST85

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili112 – 132Sequence analysisAdd BLAST21
Coiled coili140 – 230Sequence analysisAdd BLAST91
Coiled coili288 – 346Sequence analysisAdd BLAST59
Coiled coili355 – 382Sequence analysisAdd BLAST28

Sequence similaritiesi

Belongs to the intermediate filament family.UniRule annotationSAAS annotation

Keywords - Domaini

Coiled coilSequence analysisSAAS annotation

Phylogenomic databases

eggNOGiENOG410IGME Eukaryota
ENOG410XPTM LUCA
GeneTreeiENSGT00910000143989
HOGENOMiHOG000230977
HOVERGENiHBG013015
InParanoidiA2ATX5
KOiK07608
OMAiNEAMRAT
OrthoDBiEOG091G12MK
PhylomeDBiA2ATX5
TreeFamiTF330122

Family and domain databases

InterProiView protein in InterPro
IPR001664 IF
IPR006821 Intermed_filament_DNA-bd
IPR018039 Intermediate_filament_CS
PANTHERiPTHR23239 PTHR23239, 1 hit
PfamiView protein in Pfam
PF00038 Filament, 1 hit
PF04732 Filament_head, 1 hit
SMARTiView protein in SMART
SM01391 Filament, 1 hit
PROSITEiView protein in PROSITE
PS00226 IF, 1 hit

Sequencei

Sequence statusi: Complete.

A2ATX5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSYGSDHYMS SSYRKLFGDN PRFAGSRMSN VSPRSSMSSS GFRSQSVSRS
60 70 80 90 100
SASPAGYYKR SGRSSSFSPV HFDSVDFSQT SVLNNEFKIV RTNEKEQLQG
110 120 130 140 150
LNDRFAMFIE KVRNLEQHNK VLETELVSLR QRQNEPSRLA ELYQQEIRDL
160 170 180 190 200
RAQVDELNNE KSHILIERDS IEEDLQKLRG KFEEEIRARE EAEQTLRSYK
210 220 230 240 250
KDVDDATMVR VDLERKVESL LDEINFLRKV HDEEVTELTN MIQAAQISVE
260 270 280 290 300
VELSKPDLTS ALKDIRGQYE TLASKNLQSA EEWYKSKFAS LNEQATRTNE
310 320 330 340 350
AMRATREEVN DYRRQLQSKT IEIETLRGTN ESLERQIREM EEAHNAEVAG
360 370 380 390 400
YQETIGQLDL ELRNTKSEMA RHLREYQDLL NVKMALDIEI AAYRKLLEGE
410 420 430 440 450
ETHFSSGVTF SSTPSITYGY QSRSAFTSTR NPKKEREEEG HPKSKTAAKR
460 470
EENTDENVGI KKTEKNDAVD VNSN
Length:474
Mass (Da):54,641
Last modified:February 20, 2007 - v1
Checksum:iBE1574EE1AAF3FE5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL928951 Genomic DNA No translation available.
RefSeqiNP_001138256.1, NM_001144784.1
UniGeneiDr.82634

Genome annotation databases

EnsembliENSDART00000027213; ENSDARP00000012437; ENSDARG00000011862
GeneIDi555251
KEGGidre:555251

Similar proteinsi

Entry informationi

Entry nameiA2ATX5_DANRE
AccessioniPrimary (citable) accession number: A2ATX5
Entry historyiIntegrated into UniProtKB/TrEMBL: February 20, 2007
Last sequence update: February 20, 2007
Last modified: March 28, 2018
This is version 85 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
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Main funding by: National Institutes of Health