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A2ATS6

- A2ATS6_MOUSE

UniProt

A2ATS6 - A2ATS6_MOUSE

Protein
Submitted name:

Reticulon-4 receptor-like 2

Gene

Rtn4rl2

Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 62 (01 Oct 2014)
      Sequence version 1 (20 Feb 2007)
      Previous versions | rss
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    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Reticulon-4 receptor-like 2Imported
    Gene namesi
    Name:Rtn4rl2Imported
    OrganismiMus musculus (Mouse)Imported
    Taxonomic identifieri10090 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
    ProteomesiUP000000589: Chromosome 2

    Organism-specific databases

    MGIiMGI:2669796. Rtn4rl2.

    Expressioni

    Gene expression databases

    ArrayExpressiA2ATS6.

    Structurei

    3D structure databases

    ProteinModelPortaliA2ATS6.
    SMRiA2ATS6. Positions 37-342.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Keywords - Domaini

    Leucine-rich repeatSAAS annotation, RepeatSAAS annotation

    Phylogenomic databases

    GeneTreeiENSGT00750000117338.
    HOGENOMiHOG000116109.
    HOVERGENiHBG063707.
    InParanoidiA2ATS6.
    OMAiQDDIFSD.
    OrthoDBiEOG7CZK5N.
    PhylomeDBiA2ATS6.
    TreeFamiTF330080.

    Family and domain databases

    InterProiIPR000483. Cys-rich_flank_reg_C.
    IPR001611. Leu-rich_rpt.
    IPR003591. Leu-rich_rpt_typical-subtyp.
    IPR000372. LRR-contain_N.
    [Graphical view]
    PfamiPF13855. LRR_8. 2 hits.
    [Graphical view]
    SMARTiSM00369. LRR_TYP. 4 hits.
    SM00082. LRRCT. 1 hit.
    SM00013. LRRNT. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Fragment.

    A2ATS6-1 [UniParc]FASTAAdd to Basket

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    PDRRDKMLPG LRRLLQGPAS ACLLLTLLAL PSVTPSCPML CTCYSSPPTV    50
    SCQANNFSSV PLSLPPSTQR LFLQNNLIRS LRPGTFGPNL LTLWLFSNNL 100
    STIHPGTFRH LQALEELDLG DNRHLRSLEP DTFQGLERLQ SLHLYRCQLS 150
    SLPGNIFRGL VSLQYLYLQE NSLLHLQDDL FADLANLSHL FLHGNRLRLL 200
    TEHVFRGLGS LDRLLLHGNR LQGVHRAAFH GLSRLTILYL FNNSLASLPG 250
    EALADLPALE FLRLNANPWA CDCRARPLWA WFQRARVSSS DVTCATPPER 300
    QGRDLRALRD SDFQACPPPT PTRPGSRARG NSSSNHLYGV AEAGAPPADP 350
    STLYRDLPAE DSRGRQGGDA PTEDDYWGGY GGEDQRGEQT CPGAACQAPA 400
    DSRGPALSAG LRTPLLCLLP LALHHL 426
    Length:426
    Mass (Da):46,843
    Last modified:February 20, 2007 - v1
    Checksum:iA993E1C379EB5B15
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Non-terminal residuei1 – 11Imported

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AL928914 Genomic DNA. No translation available.

    Genome annotation databases

    EnsembliENSMUST00000151799; ENSMUSP00000118362; ENSMUSG00000050896.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AL928914 Genomic DNA. No translation available.

    3D structure databases

    ProteinModelPortali A2ATS6.
    SMRi A2ATS6. Positions 37-342.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSMUST00000151799 ; ENSMUSP00000118362 ; ENSMUSG00000050896 .

    Organism-specific databases

    MGIi MGI:2669796. Rtn4rl2.

    Phylogenomic databases

    GeneTreei ENSGT00750000117338.
    HOGENOMi HOG000116109.
    HOVERGENi HBG063707.
    InParanoidi A2ATS6.
    OMAi QDDIFSD.
    OrthoDBi EOG7CZK5N.
    PhylomeDBi A2ATS6.
    TreeFami TF330080.

    Miscellaneous databases

    NextBioi 35544110.
    SOURCEi Search...

    Gene expression databases

    ArrayExpressi A2ATS6.

    Family and domain databases

    InterProi IPR000483. Cys-rich_flank_reg_C.
    IPR001611. Leu-rich_rpt.
    IPR003591. Leu-rich_rpt_typical-subtyp.
    IPR000372. LRR-contain_N.
    [Graphical view ]
    Pfami PF13855. LRR_8. 2 hits.
    [Graphical view ]
    SMARTi SM00369. LRR_TYP. 4 hits.
    SM00082. LRRCT. 1 hit.
    SM00013. LRRNT. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: C57BL/6JImported.
    2. Ensembl
      Submitted (FEB-2012) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: C57BL/6JImported.

    Entry informationi

    Entry nameiA2ATS6_MOUSE
    AccessioniPrimary (citable) accession number: A2ATS6
    Entry historyi
    Integrated into UniProtKB/TrEMBL: February 20, 2007
    Last sequence update: February 20, 2007
    Last modified: October 1, 2014
    This is version 62 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Caution

    The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3