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Protein

Calcium-binding mitochondrial carrier protein SCaMC-2

Gene

Slc25a25

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score: Annotation score: 5 out of 5-Experimental evidence at protein leveli

Functioni

Calcium-dependent mitochondrial solute carrier. Mitochondrial solute carriers shuttle metabolites, nucleotides, and cofactors through the mitochondrial inner membrane. May act as a ATP-Mg/Pi exchanger that mediates the transport of Mg-ATP in exchange for phosphate, catalyzing the net uptake or efflux of adenine nucleotides into or from the mitochondria (By similarity).By similarity

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Calcium bindingi60 – 71121PROSITE-ProRule annotationAdd
BLAST

GO - Molecular functioni

GO - Biological processi

  • adipose tissue development Source: MGI
  • ATP metabolic process Source: MGI
  • calcium ion transmembrane transport Source: MGI
  • camera-type eye development Source: MGI
  • cellular respiration Source: MGI
  • multicellular organism growth Source: MGI
  • response to activity Source: MGI
  • response to dietary excess Source: MGI
  • response to food Source: MGI
  • translation Source: GO_Central
Complete GO annotation...

Keywords - Biological processi

Transport

Keywords - Ligandi

Calcium, Metal-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Calcium-binding mitochondrial carrier protein SCaMC-2
Alternative name(s):
Small calcium-binding mitochondrial carrier protein 2
Solute carrier family 25 member 25
Gene namesi
Name:Slc25a25
Synonyms:Kiaa1896, Scamc2
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 2

Organism-specific databases

MGIiMGI:1915913. Slc25a25.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Topological domaini1 – 189189Mitochondrial intermembraneSequence analysisAdd
BLAST
Transmembranei190 – 20718Helical; Name=1Sequence analysisAdd
BLAST
Topological domaini208 – 24437Mitochondrial matrixSequence analysisAdd
BLAST
Transmembranei245 – 26420Helical; Name=2Sequence analysisAdd
BLAST
Topological domaini265 – 28723Mitochondrial intermembraneSequence analysisAdd
BLAST
Transmembranei288 – 30114Helical; Name=3Sequence analysisAdd
BLAST
Topological domaini302 – 33736Mitochondrial matrixSequence analysisAdd
BLAST
Transmembranei338 – 35720Helical; Name=4Sequence analysisAdd
BLAST
Topological domaini358 – 38023Mitochondrial intermembraneSequence analysisAdd
BLAST
Transmembranei381 – 39818Helical; Name=5Sequence analysisAdd
BLAST
Topological domaini399 – 43739Mitochondrial matrixSequence analysisAdd
BLAST
Transmembranei438 – 45720Helical; Name=6Sequence analysisAdd
BLAST
Topological domaini458 – 46912Mitochondrial intermembraneSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane, Mitochondrion, Mitochondrion inner membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 469469Calcium-binding mitochondrial carrier protein SCaMC-2PRO_0000317603Add
BLAST

Proteomic databases

EPDiA2ASZ8.
MaxQBiA2ASZ8.
PaxDbiA2ASZ8.
PeptideAtlasiA2ASZ8.
PRIDEiA2ASZ8.

PTM databases

iPTMnetiA2ASZ8.

Expressioni

Gene expression databases

BgeeiA2ASZ8.
ExpressionAtlasiA2ASZ8. baseline and differential.
GenevisibleiA2ASZ8. MM.

Interactioni

Protein-protein interaction databases

IntActiA2ASZ8. 1 interaction.
MINTiMINT-4119296.
STRINGi10090.ENSMUSP00000028160.

Structurei

3D structure databases

ProteinModelPortaliA2ASZ8.
SMRiA2ASZ8. Positions 15-165, 188-445.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini47 – 8034EF-hand 1PROSITE-ProRule annotationAdd
BLAST
Domaini78 – 11336EF-hand 2PROSITE-ProRule annotationAdd
BLAST
Domaini114 – 14936EF-hand 3PROSITE-ProRule annotationAdd
BLAST
Repeati184 – 27087Solcar 1Add
BLAST
Repeati278 – 36386Solcar 2Add
BLAST
Repeati375 – 46389Solcar 3Add
BLAST

Sequence similaritiesi

Contains 3 EF-hand domains.PROSITE-ProRule annotation
Contains 3 Solcar repeats.PROSITE-ProRule annotation

Keywords - Domaini

Repeat, Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiKOG0036. Eukaryota.
ENOG410XQ4P. LUCA.
GeneTreeiENSGT00760000119245.
HOVERGENiHBG108464.
InParanoidiA2ASZ8.
KOiK14684.
OMAiLDCAKHI.
OrthoDBiEOG7V7661.
PhylomeDBiA2ASZ8.
TreeFamiTF313492.

Family and domain databases

Gene3Di1.10.238.10. 1 hit.
1.50.40.10. 1 hit.
InterProiIPR011992. EF-hand-dom_pair.
IPR002048. EF_hand_dom.
IPR002167. Graves_DC.
IPR002067. Mit_carrier.
IPR018108. Mitochondrial_sb/sol_carrier.
IPR023395. Mt_carrier_dom.
[Graphical view]
PfamiPF13499. EF-hand_7. 1 hit.
PF13833. EF-hand_8. 1 hit.
PF00153. Mito_carr. 3 hits.
[Graphical view]
PRINTSiPR00928. GRAVESDC.
PR00926. MITOCARRIER.
SMARTiSM00054. EFh. 3 hits.
[Graphical view]
SUPFAMiSSF103506. SSF103506. 1 hit.
SSF47473. SSF47473. 1 hit.
PROSITEiPS50222. EF_HAND_2. 3 hits.
PS50920. SOLCAR. 3 hits.
[Graphical view]

Sequences (5)i

Sequence statusi: Complete.

This entry describes 5 isoformsi produced by alternative splicing. AlignAdd to basket

Isoform 1 (identifier: A2ASZ8-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide

        10         20         30         40         50
MLCLCLYVPI AGAAQTEFQY FESKGLPAEL KSIFKLSVFI PSQEFSTYRQ
60 70 80 90 100
WKQKIVQAGD KDLDGQLDFE EFVHYLQDHE KKLRLVFKSL DKKNDGRIDA
110 120 130 140 150
QEIMQSLRDL GVKISEQQAE KILKSMDKNG TMTIDWNEWR DYHLLHPVEN
160 170 180 190 200
IPEIILYWKH STIFDVGENL TVPDEFTVEE RQTGMWWRHL VAGGGAGAVS
210 220 230 240 250
RTCTAPLDRL KVLMQVHASR SNNMCIVGGF TQMIREGGAK SLWRGNGINV
260 270 280 290 300
LKIAPESAIK FMAYEQMKRL VGSDQETLRI HERLVAGSLA GAIAQSSIYP
310 320 330 340 350
MEVLKTRMAL RKTGQYSGML DCARRILAKE GVAAFYKGYI PNMLGIIPYA
360 370 380 390 400
GIDLAVYETL KNTWLQRYAV NSADPGVFVL LACGTISSTC GQLASYPLAL
410 420 430 440 450
VRTRMQAQAS IEGAPEVTMS SLFKQILRTE GAFGLYRGLA PNFMKVIPAV
460
SISYVVYENL KITLGVQSR
Length:469
Mass (Da):52,621
Last modified:February 20, 2007 - v1
Checksum:iBFB0CC840738B63B
GO
Isoform 2 (identifier: A2ASZ8-2) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     1-53: MLCLCLYVPI...EFSTYRQWKQ → MVSSVLCRCV...GLHRTEGELR

Show »
Length:502
Mass (Da):55,288
Checksum:i21ABC9B940B361FE
GO
Isoform 3 (identifier: A2ASZ8-3) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     1-53: MLCLCLYVPI...EFSTYRQWKQ → MVSSVLCRCV...GLHRTEGELR
     125-125: S → RIRTGHFWGPVTY

Show »
Length:514
Mass (Da):56,773
Checksum:i46A493F31D98299F
GO
Isoform 4 (identifier: A2ASZ8-4) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     1-53: MLCLCLYVPI...EFSTYRQWKQ → MLQTLWHFLS...VVGPAEQFPK

Show »
Length:489
Mass (Da):54,593
Checksum:i922EFB5FAF79FBC4
GO
Isoform 5 (identifier: A2ASZ8-5) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     1-53: MLCLCLYVPI...EFSTYRQWKQ → MLQTLWHFLS...VVGPAEQFPK
     125-125: S → RIRTGHFWGPVTY

Show »
Length:501
Mass (Da):56,078
Checksum:i7FCC4FB5B8977778
GO

Sequence cautioni

The sequence AAH19978.1 differs from that shown. Reason: Erroneous initiation. Curated
The sequence AAH22114.1 differs from that shown. Reason: Erroneous initiation. Curated
The sequence BAC65850.1 differs from that shown. Reason: Erroneous initiation. Curated
The sequence CAM18798.1 differs from that shown. Reason: Erroneous gene model prediction. Curated
The sequence CAM18799.1 differs from that shown. Reason: Erroneous gene model prediction. Curated

Alternative sequence

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Alternative sequencei1 – 5353MLCLC…RQWKQ → MVSSVLCRCVASPPPDAAAT ASSSASSPASVGDPCGGAVC GGPDHQLRLWSLFQTLDVNR DGGLCVNDLAVGLRRLGLHR TEGELR in isoform 2 and isoform 3. 2 PublicationsVSP_031071Add
BLAST
Alternative sequencei1 – 5353MLCLC…RQWKQ → MLQTLWHFLSSFLPRAECQD SREGIDHGVRGTQAPARGDQ MSTFLGKQNGRAEATEKRPT ILLVVGPAEQFPK in isoform 4 and isoform 5. 2 PublicationsVSP_031072Add
BLAST
Alternative sequencei125 – 1251S → RIRTGHFWGPVTY in isoform 3 and isoform 5. 2 PublicationsVSP_031073

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK122568 mRNA. Translation: BAC65850.1. Different initiation.
AK049392 mRNA. Translation: BAC33730.1.
AK082756 mRNA. Translation: BAC38604.1.
AK132204 mRNA. Translation: BAE21031.1.
AL928710 Genomic DNA. Translation: CAM18795.1.
AL928710 Genomic DNA. Translation: CAM18796.1.
AL928710 Genomic DNA. Translation: CAM18797.1.
AL928710 Genomic DNA. Translation: CAM18798.1. Sequence problems.
AL928710 Genomic DNA. Translation: CAM18799.1. Sequence problems.
AL928710 Genomic DNA. Translation: CAM18800.1.
AL928710 Genomic DNA. Translation: CAM18801.1.
BC004720 mRNA. Translation: AAH04720.1.
BC019978 mRNA. Translation: AAH19978.1. Different initiation.
BC022114 mRNA. Translation: AAH22114.1. Different initiation.
BC037109 mRNA. Translation: AAH37109.1.
BC066998 mRNA. Translation: AAH66998.1.
CCDSiCCDS15915.1. [A2ASZ8-3]
CCDS50567.1. [A2ASZ8-5]
CCDS50568.1. [A2ASZ8-2]
CCDS71028.1. [A2ASZ8-1]
RefSeqiNP_001157829.1. NM_001164357.1. [A2ASZ8-2]
NP_001157830.1. NM_001164358.1. [A2ASZ8-5]
NP_001277487.1. NM_001290558.1. [A2ASZ8-1]
NP_666230.2. NM_146118.3. [A2ASZ8-3]
XP_006498017.1. XM_006497954.1. [A2ASZ8-4]
UniGeneiMm.37395.

Genome annotation databases

EnsembliENSMUST00000028160; ENSMUSP00000028160; ENSMUSG00000026819. [A2ASZ8-3]
ENSMUST00000052119; ENSMUSP00000060581; ENSMUSG00000026819. [A2ASZ8-5]
ENSMUST00000113307; ENSMUSP00000108932; ENSMUSG00000026819. [A2ASZ8-1]
ENSMUST00000113308; ENSMUSP00000108933; ENSMUSG00000026819. [A2ASZ8-4]
ENSMUST00000113310; ENSMUSP00000108936; ENSMUSG00000026819. [A2ASZ8-2]
GeneIDi227731.
KEGGimmu:227731.
UCSCiuc008jfn.2. mouse. [A2ASZ8-1]
uc008jfo.2. mouse. [A2ASZ8-5]
uc008jfp.2. mouse. [A2ASZ8-3]
uc008jfq.2. mouse. [A2ASZ8-2]

Keywords - Coding sequence diversityi

Alternative splicing

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK122568 mRNA. Translation: BAC65850.1. Different initiation.
AK049392 mRNA. Translation: BAC33730.1.
AK082756 mRNA. Translation: BAC38604.1.
AK132204 mRNA. Translation: BAE21031.1.
AL928710 Genomic DNA. Translation: CAM18795.1.
AL928710 Genomic DNA. Translation: CAM18796.1.
AL928710 Genomic DNA. Translation: CAM18797.1.
AL928710 Genomic DNA. Translation: CAM18798.1. Sequence problems.
AL928710 Genomic DNA. Translation: CAM18799.1. Sequence problems.
AL928710 Genomic DNA. Translation: CAM18800.1.
AL928710 Genomic DNA. Translation: CAM18801.1.
BC004720 mRNA. Translation: AAH04720.1.
BC019978 mRNA. Translation: AAH19978.1. Different initiation.
BC022114 mRNA. Translation: AAH22114.1. Different initiation.
BC037109 mRNA. Translation: AAH37109.1.
BC066998 mRNA. Translation: AAH66998.1.
CCDSiCCDS15915.1. [A2ASZ8-3]
CCDS50567.1. [A2ASZ8-5]
CCDS50568.1. [A2ASZ8-2]
CCDS71028.1. [A2ASZ8-1]
RefSeqiNP_001157829.1. NM_001164357.1. [A2ASZ8-2]
NP_001157830.1. NM_001164358.1. [A2ASZ8-5]
NP_001277487.1. NM_001290558.1. [A2ASZ8-1]
NP_666230.2. NM_146118.3. [A2ASZ8-3]
XP_006498017.1. XM_006497954.1. [A2ASZ8-4]
UniGeneiMm.37395.

3D structure databases

ProteinModelPortaliA2ASZ8.
SMRiA2ASZ8. Positions 15-165, 188-445.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiA2ASZ8. 1 interaction.
MINTiMINT-4119296.
STRINGi10090.ENSMUSP00000028160.

PTM databases

iPTMnetiA2ASZ8.

Proteomic databases

EPDiA2ASZ8.
MaxQBiA2ASZ8.
PaxDbiA2ASZ8.
PeptideAtlasiA2ASZ8.
PRIDEiA2ASZ8.

Protocols and materials databases

DNASUi227731.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000028160; ENSMUSP00000028160; ENSMUSG00000026819. [A2ASZ8-3]
ENSMUST00000052119; ENSMUSP00000060581; ENSMUSG00000026819. [A2ASZ8-5]
ENSMUST00000113307; ENSMUSP00000108932; ENSMUSG00000026819. [A2ASZ8-1]
ENSMUST00000113308; ENSMUSP00000108933; ENSMUSG00000026819. [A2ASZ8-4]
ENSMUST00000113310; ENSMUSP00000108936; ENSMUSG00000026819. [A2ASZ8-2]
GeneIDi227731.
KEGGimmu:227731.
UCSCiuc008jfn.2. mouse. [A2ASZ8-1]
uc008jfo.2. mouse. [A2ASZ8-5]
uc008jfp.2. mouse. [A2ASZ8-3]
uc008jfq.2. mouse. [A2ASZ8-2]

Organism-specific databases

CTDi114789.
MGIiMGI:1915913. Slc25a25.
RougeiSearch...

Phylogenomic databases

eggNOGiKOG0036. Eukaryota.
ENOG410XQ4P. LUCA.
GeneTreeiENSGT00760000119245.
HOVERGENiHBG108464.
InParanoidiA2ASZ8.
KOiK14684.
OMAiLDCAKHI.
OrthoDBiEOG7V7661.
PhylomeDBiA2ASZ8.
TreeFamiTF313492.

Miscellaneous databases

ChiTaRSiSlc25a25. mouse.
PROiA2ASZ8.
SOURCEiSearch...

Gene expression databases

BgeeiA2ASZ8.
ExpressionAtlasiA2ASZ8. baseline and differential.
GenevisibleiA2ASZ8. MM.

Family and domain databases

Gene3Di1.10.238.10. 1 hit.
1.50.40.10. 1 hit.
InterProiIPR011992. EF-hand-dom_pair.
IPR002048. EF_hand_dom.
IPR002167. Graves_DC.
IPR002067. Mit_carrier.
IPR018108. Mitochondrial_sb/sol_carrier.
IPR023395. Mt_carrier_dom.
[Graphical view]
PfamiPF13499. EF-hand_7. 1 hit.
PF13833. EF-hand_8. 1 hit.
PF00153. Mito_carr. 3 hits.
[Graphical view]
PRINTSiPR00928. GRAVESDC.
PR00926. MITOCARRIER.
SMARTiSM00054. EFh. 3 hits.
[Graphical view]
SUPFAMiSSF103506. SSF103506. 1 hit.
SSF47473. SSF47473. 1 hit.
PROSITEiPS50222. EF_HAND_2. 3 hits.
PS50920. SOLCAR. 3 hits.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Prediction of the coding sequences of mouse homologues of KIAA gene: II. The complete nucleotide sequences of 400 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries."
    Okazaki N., Kikuno R., Ohara R., Inamoto S., Aizawa H., Yuasa S., Nakajima D., Nagase T., Ohara O., Koga H.
    DNA Res. 10:35-48(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 5).
  2. "The transcriptional landscape of the mammalian genome."
    Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J.
    , Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.
    Science 309:1559-1563(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2).
    Strain: C57BL/6J.
  3. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C57BL/6J.
  4. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 1; 3 AND 5).
    Strain: C57BL/6J and FVB/N.
    Tissue: Brain, Eye, Kidney, Liver and Mammary tumor.
  5. Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
    Tissue: Brain.

Entry informationi

Entry nameiSCMC2_MOUSE
AccessioniPrimary (citable) accession number: A2ASZ8
Secondary accession number(s): A2ASZ1
, A2ASZ5, A2ASZ9, Q6NXM8, Q80T78, Q8BHG0, Q8JZT8, Q8VBT4, Q99KD3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 5, 2008
Last sequence update: February 20, 2007
Last modified: July 6, 2016
This is version 82 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.