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Protein
Submitted name:

Probable ATP-dependent RNA helicase DDX58

Gene

Ddx58

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
Probable ATP-dependent RNA helicase DDX58Imported
Gene namesi
Name:Ddx58Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 4

Organism-specific databases

MGIiMGI:2442858. Ddx58.

PTM / Processingi

Proteomic databases

MaxQBiA2AP29.
PeptideAtlasiA2AP29.

Expressioni

Gene expression databases

BgeeiENSMUSG00000040296.
ExpressionAtlasiA2AP29. baseline and differential.

Structurei

3D structure databases

SMRiA2AP29.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini207 – 386Helicase ATP-bindingInterPro annotationAdd BLAST180
Domaini566 – 707Helicase C-terminalInterPro annotationAdd BLAST142

Phylogenomic databases

GeneTreeiENSGT00510000046789.
HOGENOMiHOG000230911.
HOVERGENiHBG052325.

Family and domain databases

CDDicd00079. HELICc. 1 hit.
InterProiView protein in InterPro
IPR031964. CARD_dom.
IPR006935. Helicase/UvrB_N.
IPR014001. Helicase_ATP-bd.
IPR001650. Helicase_C.
IPR027417. P-loop_NTPase.
PfamiView protein in Pfam
PF16739. CARD_2. 1 hit.
PF00271. Helicase_C. 1 hit.
PF04851. ResIII. 1 hit.
SMARTiView protein in SMART
SM00487. DEXDc. 1 hit.
SM00490. HELICc. 1 hit.
SUPFAMiSSF52540. SSF52540. 3 hits.
PROSITEiView protein in PROSITE
PS51192. HELICASE_ATP_BIND_1. 1 hit.
PS51194. HELICASE_CTER. 1 hit.

Sequencei

Sequence statusi: Fragment.

A2AP29-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTAEQRQNLQ AFRDYIKKIL DPTYILSYMS SWLEDGYCGL CEAIESWDFQ
60 70 80 90 100
KIEKLEEHRL LLRRLEPEFK ATVDPNDILS ELSECLINQE CEEIRQIRDT
110 120 130 140 150
KGRMAGAEKM AECLIRSDKE NWPKVLQLAL EKDNSKFSEL WIVDKGFKRA
160 170 180 190 200
ESKADEDDGA EASSIQIFIQ EEPECQNLSQ NPGPPSEASS NNLHSPLKPR
210 220 230 240 250
NYQLELALPA KKGKNTIICA PTGCGKTFVS LLICEHHLKK FPCGQKGKVV
260 270 280 290 300
FFANQIPVYE QQATVFSRYF ERLGYNIASI SGATSDSVSV QHIIEDNDII
310 320 330 340 350
ILTPQILVNN LNNGAIPSLS VFTLMIFDEC HNTSKNHPYN QIMFRYLDHK
360 370 380 390 400
LGESRDPLPQ VVGLTASVGV GDAKTAEEAM QHICKLCAAL DASVIATVRD
410 420 430 440 450
NVAELEQVVY KPQKISRKVA SRTSNTFKCI ISQLMKETEK LAKDVSEELG
460 470 480 490 500
KLFQIQNREF GTQKYEQWIV GVHKACSVFQ MADKEEESRV CKALFLYTSH
510 520 530 540 550
LRKYNDALII SEDAQMTDAL NYLKAFFHDV REAAFDETER ELTRRFEEKL
560 570 580 590 600
EELEKVSRDP SNENPKLRDL YLVLQEEYHL KPETKTILFV KTRALVDALK
610 620 630 640 650
KWIEENPALS FLKPGILTGR GRTNRATGMT LPAQKCVLEA FRASGDNNIL
660 670 680 690 700
IATSVADEGI DIAECNLVIL YEYVGNVIKM IQTRGRGRAR DSKCFLLTSS

ADVIEKE
Length:707
Mass (Da):80,200
Last modified:February 20, 2007 - v1
Checksum:iFE5103B8B9EB4544
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei707Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL831793 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSMUST00000142055; ENSMUSP00000115052; ENSMUSG00000040296.

Similar proteinsi

Entry informationi

Entry nameiA2AP29_MOUSE
AccessioniPrimary (citable) accession number: A2AP29
Entry historyiIntegrated into UniProtKB/TrEMBL: February 20, 2007
Last sequence update: February 20, 2007
Last modified: October 25, 2017
This is version 84 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported