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Protein
Submitted name:

Protein transport protein Sec23B

Gene

Sec23b

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Protein transport protein Sec23BImported
Gene namesi
Name:Sec23bImported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 2

Organism-specific databases

MGIiMGI:1350925. Sec23b.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Proteomic databases

EPDiA2AN98.
PaxDbiA2AN98.

Expressioni

Gene expression databases

BgeeiA2AN98.
ExpressionAtlasiA2AN98. baseline and differential.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000028916.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini58 – 9841zf-Sec23_Sec24InterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiKOG1986. Eukaryota.
COG5047. LUCA.
GeneTreeiENSGT00390000006916.
HOGENOMiHOG000197806.
HOVERGENiHBG099047.

Family and domain databases

InterProiIPR006895. Znf_Sec23_Sec24.
[Graphical view]
PfamiPF04810. zf-Sec23_Sec24. 1 hit.
[Graphical view]
SUPFAMiSSF82919. SSF82919. 1 hit.

Sequencei

Sequence statusi: Fragment.

A2AN98-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MATYLEFIQQ NEERDGVRFS WNVWPSSRLE ATRMVVPLAC LLTPLKERPD
60 70 80 90 100
LPPVQYEPVL CSRPTCKAIL NPLCQVDYRA KLWACNFCFQ RNQFPPAYAG
110 120
ISEVNQPAEL MPQFSTIEYM IQ
Length:122
Mass (Da):14,159
Last modified:February 20, 2007 - v1
Checksum:iA3DA57F30595A0F3
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei122 – 1221Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL808119 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSMUST00000149697; ENSMUSP00000122819; ENSMUSG00000027429.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL808119 Genomic DNA. No translation available.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000028916.

Proteomic databases

EPDiA2AN98.
PaxDbiA2AN98.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000149697; ENSMUSP00000122819; ENSMUSG00000027429.

Organism-specific databases

MGIiMGI:1350925. Sec23b.

Phylogenomic databases

eggNOGiKOG1986. Eukaryota.
COG5047. LUCA.
GeneTreeiENSGT00390000006916.
HOGENOMiHOG000197806.
HOVERGENiHBG099047.

Miscellaneous databases

ChiTaRSiSec23b. mouse.
SOURCEiSearch...

Gene expression databases

BgeeiA2AN98.
ExpressionAtlasiA2AN98. baseline and differential.

Family and domain databases

InterProiIPR006895. Znf_Sec23_Sec24.
[Graphical view]
PfamiPF04810. zf-Sec23_Sec24. 1 hit.
[Graphical view]
SUPFAMiSSF82919. SSF82919. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C57BL/6JImported.
  2. Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
  3. Ensembl
    Submitted (FEB-2012) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: C57BL/6JImported.

Entry informationi

Entry nameiA2AN98_MOUSE
AccessioniPrimary (citable) accession number: A2AN98
Entry historyi
Integrated into UniProtKB/TrEMBL: February 20, 2007
Last sequence update: February 20, 2007
Last modified: June 8, 2016
This is version 61 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.