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Protein
Submitted name:

Sigma 1 receptor variant SR-1A

Gene

Sigmar1

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. receptor activity Source: MGI

GO - Biological processi

  1. lipid transport Source: InterPro
  2. regulation of neuron apoptotic process Source: MGI
Complete GO annotation...

Keywords - Molecular functioni

ReceptorImported

Names & Taxonomyi

Protein namesi
Submitted name:
Sigma 1 receptor variant SR-1AImported
Gene namesi
Name:Sigmar1Imported
Synonyms:Oprs1Imported
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:1195268. Sigmar1.

Subcellular locationi

GO - Cellular componenti

  1. nuclear envelope Source: MGI
Complete GO annotation...

PTM / Processingi

Proteomic databases

PRIDEiA2AMS0.

Expressioni

Gene expression databases

BgeeiA2AMS0.
ExpressionAtlasiA2AMS0. baseline and differential.
GenevestigatoriA2AMS0.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000056027.

Family & Domainsi

Phylogenomic databases

HOVERGENiHBG058220.

Family and domain databases

InterProiIPR006716. ERG2_sigma1_rcpt-like.
IPR028545. SIGMAR1.
[Graphical view]
PANTHERiPTHR10868. PTHR10868. 1 hit.
PfamiPF04622. ERG2_Sigma1R. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A2AMS0-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MPWAAGRRWA WITLILTIIA VLIQAAWLWL GTQNFVFSRE EIAQLARQYA
60 70 80 90 100
GLDHELAFSR LIVELRRLHP GHVLPDEELQ WVFVNAGGWM GAMCILHASL
110 120 130 140 150
SEYVLLFGTA LGSHGHSGET VVHGPGEATA LEWGPNTWMV EYGRGVIPST
160 170 180 190
LFFALADTFF STQDYLTLFY TLRAYARGLR LELTTYLFGQ DS
Length:192
Mass (Da):21,633
Last modified:February 20, 2007 - v1
Checksum:i6C75160BF446D3BC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY390764 mRNA. Translation: AAR27306.1.
RefSeqiNP_001273468.1. NM_001286539.1.
UniGeneiMm.425181.

Genome annotation databases

GeneIDi18391.
KEGGimmu:18391.
UCSCiuc008sjl.1. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY390764 mRNA. Translation: AAR27306.1.
RefSeqiNP_001273468.1. NM_001286539.1.
UniGeneiMm.425181.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000056027.

Proteomic databases

PRIDEiA2AMS0.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi18391.
KEGGimmu:18391.
UCSCiuc008sjl.1. mouse.

Organism-specific databases

CTDi10280.
MGIiMGI:1195268. Sigmar1.

Phylogenomic databases

HOVERGENiHBG058220.

Miscellaneous databases

ChiTaRSiSigmar1. mouse.
NextBioi35543711.
SOURCEiSearch...

Gene expression databases

BgeeiA2AMS0.
ExpressionAtlasiA2AMS0. baseline and differential.
GenevestigatoriA2AMS0.

Family and domain databases

InterProiIPR006716. ERG2_sigma1_rcpt-like.
IPR028545. SIGMAR1.
[Graphical view]
PANTHERiPTHR10868. PTHR10868. 1 hit.
PfamiPF04622. ERG2_Sigma1R. 2 hits.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Identification and characterization of five new splice variants from the mouse sigma 1 receptor gene (Oprs1)."
    Pan L.P., Pasternak G.W., Pan Y.
    Submitted (SEP-2003) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: CD-1Imported.

Entry informationi

Entry nameiA2AMS0_MOUSE
AccessioniPrimary (citable) accession number: A2AMS0
Entry historyi
Integrated into UniProtKB/TrEMBL: February 20, 2007
Last sequence update: February 20, 2007
Last modified: February 4, 2015
This is version 49 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.