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Protein
Submitted name:

Histone-binding protein RBBP7

Gene

Rbbp7

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Histone-binding protein RBBP7Imported
Gene namesi
Name:Rbbp7Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome X

Organism-specific databases

MGIiMGI:1194910. Rbbp7.

Subcellular locationi

  • Nucleus SAAS annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

NucleusSAAS annotation

PTM / Processingi

Proteomic databases

MaxQBiA2AFJ1.
PaxDbiA2AFJ1.
PeptideAtlasiA2AFJ1.
PRIDEiA2AFJ1.

Expressioni

Gene expression databases

BgeeiENSMUSG00000031353.
ExpressionAtlasiA2AFJ1. baseline and differential.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000033720.

Structurei

3D structure databases

ProteinModelPortaliA2AFJ1.
SMRiA2AFJ1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini163 – 402WD_REPEATS_REGIONInterPro annotationAdd BLAST240

Keywords - Domaini

RepeatSAAS annotation, WD repeatSAAS annotation

Phylogenomic databases

eggNOGiKOG0264. Eukaryota.
ENOG410XNU9. LUCA.
GeneTreeiENSGT00570000079069.
HOGENOMiHOG000160330.
HOVERGENiHBG053236.

Family and domain databases

Gene3Di2.130.10.10. 1 hit.
InterProiIPR020472. G-protein_beta_WD-40_rep.
IPR022052. Histone-bd_RBBP4_N.
IPR015943. WD40/YVTN_repeat-like_dom.
IPR001680. WD40_repeat.
IPR019775. WD40_repeat_CS.
IPR017986. WD40_repeat_dom.
[Graphical view]
PfamiPF12265. CAF1C_H4-bd. 1 hit.
PF00400. WD40. 5 hits.
[Graphical view]
PRINTSiPR00320. GPROTEINBRPT.
SMARTiSM00320. WD40. 6 hits.
[Graphical view]
SUPFAMiSSF50978. SSF50978. 1 hit.
PROSITEiPS00678. WD_REPEATS_1. 3 hits.
PS50082. WD_REPEATS_2. 5 hits.
PS50294. WD_REPEATS_REGION. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A2AFJ1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASKEMFEDT VEERVINEEY KIWKKNTPFL YDLVMTHALQ WPSLTVQWLP
60 70 80 90 100
EVTKPEGKDY ALHWLVLGTH TSDEQNHLVV ARVHIPNDDA QFDASHCDSD
110 120 130 140 150
KGGKIECEIK INHEGEVNRA RYMPQNPHII ATKTPSSDVL VFDYTKHPAK
160 170 180 190 200
PDPSGECNPD LRLRGHQKEG YGLSWNSNLS GHLLSASDDH TVCLWDINAG
210 220 230 240 250
PKEGKIVDAK AIFTGHSAVV EDVAWHLLHE SLFGSVADDQ KLMIWDTRSN
260 270 280 290 300
TTSKPSHLVD AHTAEVNCLS FNPYSEFILA TGSADKTVAL WDLRNLKLKL
310 320 330 340 350
HTFESHKDEI FQVHWSPHNE TILASSGTDR RLNVWDLSKI GEEQSAEDAE
360 370 380 390 400
DGPPELLFIH GGHTAKISDF SWNPNEPWVI CSVSEDNIMQ IWQMAENIYN
410
DEESDVTASE LEGQGS
Length:416
Mass (Da):46,908
Last modified:February 20, 2007 - v1
Checksum:i9D31B7665D628B76
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL672123 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSMUST00000112327; ENSMUSP00000107946; ENSMUSG00000031353.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL672123 Genomic DNA. No translation available.

3D structure databases

ProteinModelPortaliA2AFJ1.
SMRiA2AFJ1.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000033720.

Proteomic databases

MaxQBiA2AFJ1.
PaxDbiA2AFJ1.
PeptideAtlasiA2AFJ1.
PRIDEiA2AFJ1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000112327; ENSMUSP00000107946; ENSMUSG00000031353.

Organism-specific databases

MGIiMGI:1194910. Rbbp7.

Phylogenomic databases

eggNOGiKOG0264. Eukaryota.
ENOG410XNU9. LUCA.
GeneTreeiENSGT00570000079069.
HOGENOMiHOG000160330.
HOVERGENiHBG053236.

Miscellaneous databases

ChiTaRSiRbbp7. mouse.
SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000031353.
ExpressionAtlasiA2AFJ1. baseline and differential.

Family and domain databases

Gene3Di2.130.10.10. 1 hit.
InterProiIPR020472. G-protein_beta_WD-40_rep.
IPR022052. Histone-bd_RBBP4_N.
IPR015943. WD40/YVTN_repeat-like_dom.
IPR001680. WD40_repeat.
IPR019775. WD40_repeat_CS.
IPR017986. WD40_repeat_dom.
[Graphical view]
PfamiPF12265. CAF1C_H4-bd. 1 hit.
PF00400. WD40. 5 hits.
[Graphical view]
PRINTSiPR00320. GPROTEINBRPT.
SMARTiSM00320. WD40. 6 hits.
[Graphical view]
SUPFAMiSSF50978. SSF50978. 1 hit.
PROSITEiPS00678. WD_REPEATS_1. 3 hits.
PS50082. WD_REPEATS_2. 5 hits.
PS50294. WD_REPEATS_REGION. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiA2AFJ1_MOUSE
AccessioniPrimary (citable) accession number: A2AFJ1
Entry historyi
Integrated into UniProtKB/TrEMBL: February 20, 2007
Last sequence update: February 20, 2007
Last modified: November 30, 2016
This is version 82 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.